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PNPLA2 patatin like phospholipase domain containing 2 [ Rana temporaria (common frog) ]

Gene ID: 120917311, updated on 18-Sep-2024

Summary

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Gene symbol
PNPLA2
Gene description
patatin like phospholipase domain containing 2
See related
EnsemblRapid:ENSRTEG00010016332
Gene type
protein coding
RefSeq status
MODEL
Organism
Rana temporaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Ranoidea; Ranidae; Rana; Rana
Orthologs
human mouse all
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Genomic context

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See PNPLA2 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
10
Annotation release Status Assembly Chr Location
100 current aRanTem1.1 (GCF_905171775.1) 11 NC_053499.1 (52337165..52409289)

Chromosome 11 - NC_053499.1Genomic Context describing neighboring genes Neighboring gene p53-induced death domain protein 1 Neighboring gene ribosomal protein lateral stalk subunit P2 Neighboring gene calcium release activated channel regulator 2B Neighboring gene CD151 molecule (Raph blood group)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053499.1 Chromosome 11 Reference aRanTem1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables triacylglycerol lipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of triglyceride catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in triglyceride catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lipid droplet IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
patatin-like phospholipase domain-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rana temporaria Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aRanTem1.1

Genomic

  1. NC_053499.1 Reference aRanTem1.1

    Range
    52337165..52409289
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040328517.1 → XP_040184451.1  patatin-like phospholipase domain-containing protein 2 isoform X1

    Conserved Domains (1) summary
    cd07220
    Location:4 → 252
    Pat_PNPLA2; Patatin-like phospholipase domain containing protein 2

  2. XM_040328519.1 → XP_040184453.1  patatin-like phospholipase domain-containing protein 2 isoform X2

    Related
    ENSRTEP00010020865.1, ENSRTET00010027751.1
    Conserved Domains (1) summary
    cd07220
    Location:4 → 252
    Pat_PNPLA2; Patatin-like phospholipase domain containing protein 2

  3. XM_040328518.1 → XP_040184452.1  patatin-like phospholipase domain-containing protein 2 isoform X1

    Conserved Domains (1) summary
    cd07220
    Location:4 → 252
    Pat_PNPLA2; Patatin-like phospholipase domain containing protein 2
Nucleotide Protein
Heading Accession and Version

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