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INPP5E inositol polyphosphate-5-phosphatase E [ Rana temporaria (common frog) ]

Gene ID: 120913837, updated on 21-Mar-2024

Summary

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Gene symbol
INPP5E
Gene description
inositol polyphosphate-5-phosphatase E
See related
EnsemblRapid:ENSRTEG00010007546
Gene type
protein coding
RefSeq status
MODEL
Organism
Rana temporaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Ranoidea; Ranidae; Rana; Rana
Orthologs
human mouse all
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Genomic context

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See INPP5E in Genome Data Viewer
Location:
chromosome: 9
Exon count:
12
Annotation release Status Assembly Chr Location
100 current aRanTem1.1 (GCF_905171775.1) 9 NC_053497.1 (110301788..110330312)

Chromosome 9 - NC_053497.1Genomic Context describing neighboring genes Neighboring gene notch receptor 1 Neighboring gene SEC16 homolog A, endoplasmic reticulum export factor Neighboring gene peptidase, mitochondrial processing subunit alpha Neighboring gene endosome associated trafficking regulator 1 Neighboring gene NACC family member 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053497.1 Chromosome 9 Reference aRanTem1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables inositol-polyphosphate 5-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol polyphosphate 5-phosphatase type IV

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rana temporaria Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aRanTem1.1

Genomic

  1. NC_053497.1 Reference aRanTem1.1

    Range
    110301788..110330312
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040324115.1 → XP_040180049.1  phosphatidylinositol polyphosphate 5-phosphatase type IV

    Related
    ENSRTEP00010008849.1, ENSRTET00010012390.1
    Conserved Domains (1) summary
    cd09095
    Location:289 → 587
    INPP5c_INPP5E-like; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of Inositol polyphosphate-5-phosphatase E and related proteins

  2. XM_040324114.1 → XP_040180048.1  phosphatidylinositol polyphosphate 5-phosphatase type IV

    Conserved Domains (1) summary
    cd09095
    Location:289 → 587
    INPP5c_INPP5E-like; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of Inositol polyphosphate-5-phosphatase E and related proteins

  3. XM_040324116.1 → XP_040180050.1  phosphatidylinositol polyphosphate 5-phosphatase type IV

    Related
    ENSRTEP00010008848.1, ENSRTET00010012389.1
    Conserved Domains (1) summary
    cd09095
    Location:289 → 587
    INPP5c_INPP5E-like; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of Inositol polyphosphate-5-phosphatase E and related proteins
Nucleotide Protein
Heading Accession and Version

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