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ITPKC inositol-trisphosphate 3-kinase C [ Rana temporaria (common frog) ]

Gene ID: 120913308, updated on 21-Mar-2024

Summary

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Gene symbol
ITPKC
Gene description
inositol-trisphosphate 3-kinase C
See related
EnsemblRapid:ENSRTEG00010009665
Gene type
protein coding
RefSeq status
MODEL
Organism
Rana temporaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Ranoidea; Ranidae; Rana; Rana
Orthologs
human mouse all
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Genomic context

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See ITPKC in Genome Data Viewer
Location:
chromosome: 9
Exon count:
8
Annotation release Status Assembly Chr Location
100 current aRanTem1.1 (GCF_905171775.1) 9 NC_053497.1 (36485512..36555235)

Chromosome 9 - NC_053497.1Genomic Context describing neighboring genes Neighboring gene NUMB like endocytic adaptor protein Neighboring gene coenzyme Q8B Neighboring gene actin maturation protease Neighboring gene small nuclear ribonucleoprotein polypeptide A

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053497.1 Chromosome 9 Reference aRanTem1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables inositol tetrakisphosphate kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables inositol-1,4,5-trisphosphate 3-kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in inositol phosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
inositol-trisphosphate 3-kinase C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rana temporaria Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aRanTem1.1

Genomic

  1. NC_053497.1 Reference aRanTem1.1

    Range
    36485512..36555235
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040323171.1 → XP_040179105.1  inositol-trisphosphate 3-kinase C isoform X3

    Conserved Domains (2) summary
    pfam09606
    Location:79 → 319
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    cl12283
    Location:733 → 968
    IPK; Inositol polyphosphate kinase

  2. XM_040323168.1 → XP_040179102.1  inositol-trisphosphate 3-kinase C isoform X1

    Related
    ENSRTEP00010012015.1, ENSRTET00010016239.1
    Conserved Domains (1) summary
    cl12283
    Location:759 → 994
    IPK; Inositol polyphosphate kinase

  3. XM_040323169.1 → XP_040179103.1  inositol-trisphosphate 3-kinase C isoform X2

    Conserved Domains (1) summary
    cl12283
    Location:749 → 984
    IPK; Inositol polyphosphate kinase
Nucleotide Protein
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