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LOC120901420 laminin subunit alpha-1 [ Anopheles arabiensis ]

Gene ID: 120901420, updated on 10-May-2024

Summary

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Gene symbol
LOC120901420
Gene description
laminin subunit alpha-1
See related
VectorBase:AARA21_012789
Gene type
protein coding
RefSeq status
MODEL
Organism
Anopheles arabiensis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
Orthologs
fruit fly all
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Genomic context

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Location:
chromosome: 3
Exon count:
25
Annotation release Status Assembly Chr Location
100 current AaraD3 (GCF_016920715.1) 3 NC_053518.1 (2052700..2129146, complement)

Chromosome 3 - NC_053518.1Genomic Context describing neighboring genes Neighboring gene RAB3 GTPase activating protein subunit 1 Neighboring gene leucine-rich repeat and fibronectin type-III domain-containing protein hattifattener Neighboring gene Dual-specificity tyrosine phosphorylation-regulated kinase 2 Neighboring gene uncharacterized LOC120903904 Neighboring gene uncharacterized LOC120901450

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053518.1 Chromosome 3 Reference AaraD3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in basement membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
laminin subunit alpha-1; laminin subunit alpha-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anopheles arabiensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AaraD3 Primary Assembly

Genomic

  1. NC_053518.1 Reference AaraD3 Primary Assembly

    Range
    2052700..2129146 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040309356.1 → XP_040165290.1  laminin subunit alpha-1 isoform X1

    Conserved Domains (7) summary
    smart00180
    Location:1135 → 1180
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    COG1196
    Location:1797 → 2083
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd00055
    Location:1230 → 1272
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00110
    Location:3118 → 3275
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    TIGR02168
    Location:1933 → 2306
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    cl02548
    Location:635 → 768
    Laminin_B; Laminin B (Domain IV)
    cl02806
    Location:125 → 353
    Laminin_N; Laminin N-terminal (Domain VI)

  2. XM_040309357.1 → XP_040165291.1  laminin subunit alpha-2 isoform X2

    Conserved Domains (7) summary
    smart00180
    Location:1135 → 1180
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    COG1196
    Location:1797 → 2083
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd00055
    Location:1230 → 1272
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00110
    Location:2713 → 2873
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    TIGR02168
    Location:1933 → 2306
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    cl02548
    Location:635 → 768
    Laminin_B; Laminin B (Domain IV)
    cl02806
    Location:125 → 353
    Laminin_N; Laminin N-terminal (Domain VI)
Nucleotide Protein
Heading Accession and Version

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