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sxc O-linked N-acetylglucosamine (GlcNAc) transferase sxc [ Anopheles arabiensis ]

Gene ID: 120898039, updated on 15-May-2024

Summary

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Gene symbol
sxc
Gene description
O-linked N-acetylglucosamine (GlcNAc) transferase sxc
See related
VectorBase:AARA21_009707
Gene type
protein coding
RefSeq status
MODEL
Organism
Anopheles arabiensis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
Orthologs
fruit fly all
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Genomic context

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See sxc in Genome Data Viewer
Location:
chromosome: 2
Exon count:
9
Annotation release Status Assembly Chr Location
100 current AaraD3 (GCF_016920715.1) 2 NC_053517.1 (97083087..97103225)

Chromosome 2 - NC_053517.1Genomic Context describing neighboring genes Neighboring gene cadherin EGF LAG seven-pass G-type receptor 3 Neighboring gene uncharacterized LOC120898041 Neighboring gene syntaxin-6 Neighboring gene chymotrypsin inhibitor-like Neighboring gene chymotrypsin inhibitor Ani s 6-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053517.1 Chromosome 2 Reference AaraD3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anopheles arabiensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AaraD3 Primary Assembly

Genomic

  1. NC_053517.1 Reference AaraD3 Primary Assembly

    Range
    97083087..97103225
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040303353.1 → XP_040159287.1  UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X1

    UniProtKB/TrEMBL
    A0A499FTI1
    Conserved Domains (3) summary
    COG3914
    Location:426 → 1107
    Spy; Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
    TIGR02917
    Location:111 → 556
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:452 → 480
    TPR; TPR repeat [structural motif]

  2. XM_040303354.1 → XP_040159288.1  UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X2

    Conserved Domains (3) summary
    COG3914
    Location:362 → 1043
    Spy; Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
    TIGR02917
    Location:47 → 492
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:388 → 416
    TPR; TPR repeat [structural motif]

  3. XM_040303356.1 → XP_040159290.1  UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X2

    Conserved Domains (3) summary
    COG3914
    Location:362 → 1043
    Spy; Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
    TIGR02917
    Location:47 → 492
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:388 → 416
    TPR; TPR repeat [structural motif]

  4. XM_040303355.1 → XP_040159289.1  UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X2

    Conserved Domains (3) summary
    COG3914
    Location:362 → 1043
    Spy; Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
    TIGR02917
    Location:47 → 492
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:388 → 416
    TPR; TPR repeat [structural motif]
Nucleotide Protein
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