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The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference SCBI_Odam_1.1 Primary Assembly
Genomic
-
NW_024070207.1 Reference SCBI_Odam_1.1 Primary Assembly
- Range
-
57788767..57811762 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_040265459.1 → XP_040121393.1 host cell factor 1 isoform X9
- Conserved Domains (3) summary
-
- PLN02193
Location:10 → 322
- PLN02193; nitrile-specifier protein
- cd00063
Location:1813 → 1842
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- sd00038
Location:200 → 253
- Kelch; KELCH repeat [structural motif]
-
XM_040265456.1 → XP_040121390.1 host cell factor 1 isoform X6
- Conserved Domains (4) summary
-
- PLN02193
Location:10 → 322
- PLN02193; nitrile-specifier protein
- cd00063
Location:1857 → 1886
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- sd00038
Location:200 → 253
- Kelch; KELCH repeat [structural motif]
- pfam06070
Location:1397 → 1604
- Herpes_UL32; Herpesvirus large structural phosphoprotein UL32
-
XM_040265455.1 → XP_040121389.1 host cell factor 1 isoform X5
- Conserved Domains (4) summary
-
- PLN02193
Location:10 → 322
- PLN02193; nitrile-specifier protein
- cd00063
Location:1858 → 1887
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- sd00038
Location:200 → 253
- Kelch; KELCH repeat [structural motif]
- pfam06070
Location:1397 → 1604
- Herpes_UL32; Herpesvirus large structural phosphoprotein UL32
-
XM_040265458.1 → XP_040121392.1 host cell factor 1 isoform X8
- Conserved Domains (4) summary
-
- PLN02193
Location:10 → 322
- PLN02193; nitrile-specifier protein
- PRK13914
Location:467 → 809
- PRK13914; invasion associated endopeptidase
- cd00063
Location:1825 → 1854
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- sd00038
Location:200 → 253
- Kelch; KELCH repeat [structural motif]
-
XM_040265457.1 → XP_040121391.1 host cell factor 1 isoform X7
- Conserved Domains (4) summary
-
- PLN02193
Location:10 → 322
- PLN02193; nitrile-specifier protein
- PRK13914
Location:467 → 809
- PRK13914; invasion associated endopeptidase
- cd00063
Location:1826 → 1855
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- sd00038
Location:200 → 253
- Kelch; KELCH repeat [structural motif]
-
XM_040265454.1 → XP_040121388.1 host cell factor 1 isoform X4
- Conserved Domains (4) summary
-
- PLN02193
Location:10 → 322
- PLN02193; nitrile-specifier protein
- PRK13914
Location:467 → 809
- PRK13914; invasion associated endopeptidase
- cd00063
Location:1868 → 1897
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- sd00038
Location:200 → 253
- Kelch; KELCH repeat [structural motif]
-
XM_040265453.1 → XP_040121387.1 host cell factor 1 isoform X3
- Conserved Domains (4) summary
-
- PLN02193
Location:10 → 322
- PLN02193; nitrile-specifier protein
- PRK13914
Location:467 → 809
- PRK13914; invasion associated endopeptidase
- cd00063
Location:1869 → 1898
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- sd00038
Location:200 → 253
- Kelch; KELCH repeat [structural motif]
-
XM_040265452.1 → XP_040121386.1 host cell factor 1 isoform X2
- Conserved Domains (5) summary
-
- PLN02193
Location:10 → 322
- PLN02193; nitrile-specifier protein
- PRK13914
Location:467 → 809
- PRK13914; invasion associated endopeptidase
- cd00063
Location:1869 → 1898
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- sd00038
Location:200 → 253
- Kelch; KELCH repeat [structural motif]
- pfam06070
Location:1409 → 1616
- Herpes_UL32; Herpesvirus large structural phosphoprotein UL32
-
XM_040265451.1 → XP_040121385.1 host cell factor 1 isoform X1
- Conserved Domains (5) summary
-
- PLN02193
Location:10 → 322
- PLN02193; nitrile-specifier protein
- PRK13914
Location:467 → 809
- PRK13914; invasion associated endopeptidase
- cd00063
Location:1870 → 1899
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- sd00038
Location:200 → 253
- Kelch; KELCH repeat [structural motif]
- pfam06070
Location:1409 → 1616
- Herpes_UL32; Herpesvirus large structural phosphoprotein UL32