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SIGLEC15 sialic acid binding Ig like lectin 15 [ Oryx dammah (scimitar-horned oryx) ]

Gene ID: 120881027, updated on 21-Mar-2024

Summary

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Gene symbol
SIGLEC15
Gene description
sialic acid binding Ig like lectin 15
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryx dammah
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Hippotraginae; Oryx
Orthologs
human mouse all
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Genomic context

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See SIGLEC15 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current SCBI_Odam_1.1 (GCF_014754425.2) Unplaced Scaffold NW_024070206.1 (16267499..16284543, complement)

NW_024070206.1Genomic Context describing neighboring genes Neighboring gene proline-serine-threonine phosphatase interacting protein 2 Neighboring gene nucleolar RNA helicase 2-like Neighboring gene ectopic P-granules 5 autophagy tethering factor Neighboring gene solute carrier family 14 member 1 (Kidd blood group) Neighboring gene solute carrier family 14 member 2 Neighboring gene uncharacterized LOC120881031

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024070206 Unplaced Scaffold Reference SCBI_Odam_1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of bone resorption IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of osteoclast development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sialic acid-binding Ig-like lectin 15

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryx dammah Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SCBI_Odam_1.1 Primary Assembly

Genomic

  1. NW_024070206.1 Reference SCBI_Odam_1.1 Primary Assembly

    Range
    16267499..16284543 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040264564.1 → XP_040120498.1  sialic acid-binding Ig-like lectin 15

    Conserved Domains (3) summary
    smart00409
    Location:49 → 164
    IG; Immunoglobulin
    cd00096
    Location:196 → 200
    Ig; Ig strand C [structural motif]
    cl11960
    Location:187 → 252
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

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