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CNTN2 contactin 2 [ Oryx dammah (scimitar-horned oryx) ]

Gene ID: 120879966, updated on 21-Mar-2024

Summary

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Gene symbol
CNTN2
Gene description
contactin 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryx dammah
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Hippotraginae; Oryx
Orthologs
human mouse all
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Genomic context

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See CNTN2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
23
Annotation release Status Assembly Chr Location
100 current SCBI_Odam_1.1 (GCF_014754425.2) Unplaced Scaffold NW_024070205.1 (76162079..76195201, complement)

NW_024070205.1Genomic Context describing neighboring genes Neighboring gene RB binding protein 5, histone lysine methyltransferase complex subunit Neighboring gene transmembrane protein 81 Neighboring gene neurofascin Neighboring gene leucine rich repeat neuronal 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024070205 Unplaced Scaffold Reference SCBI_Odam_1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell-cell adhesion mediator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in brain development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
contactin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryx dammah Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SCBI_Odam_1.1 Primary Assembly

Genomic

  1. NW_024070205.1 Reference SCBI_Odam_1.1 Primary Assembly

    Range
    76162079..76195201 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040262992.1 → XP_040118926.1  contactin-2

    Conserved Domains (6) summary
    smart00408
    Location:55 → 118
    IGc2; Immunoglobulin C-2 Type
    smart00409
    Location:515 → 604
    IG; Immunoglobulin
    smart00410
    Location:430 → 505
    IG_like; Immunoglobulin like
    cd00063
    Location:608 → 705
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd00096
    Location:328 → 331
    Ig; Ig strand A [structural motif]
    cl11960
    Location:328 → 412
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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