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PLPP1 phospholipid phosphatase 1 [ Oryx dammah (scimitar-horned oryx) ]

Gene ID: 120879519, updated on 21-Mar-2024

Summary

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Gene symbol
PLPP1
Gene description
phospholipid phosphatase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryx dammah
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Hippotraginae; Oryx
Orthologs
human mouse all
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Genomic context

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See PLPP1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current SCBI_Odam_1.1 (GCF_014754425.2) Unplaced Scaffold NW_024070204.1 (47577964..47689639, complement)

NW_024070204.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120879522 Neighboring gene 60S ribosomal protein L35a-like Neighboring gene DExH-box helicase 29 Neighboring gene Mtr4 exosome RNA helicase Neighboring gene uncharacterized LOC120879521 Neighboring gene solute carrier family 38 member 9 Neighboring gene DEAD-box helicase 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024070204 Unplaced Scaffold Reference SCBI_Odam_1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phospholipid dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phospholipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phospholipid phosphatase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryx dammah Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SCBI_Odam_1.1 Primary Assembly

Genomic

  1. NW_024070204.1 Reference SCBI_Odam_1.1 Primary Assembly

    Range
    47577964..47689639 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040262539.1 → XP_040118473.1  phospholipid phosphatase 1 isoform X2

    Conserved Domains (1) summary
    cd03384
    Location:98 → 243
    PAP2_wunen; PAP2, wunen subfamily. Most likely a family of membrane associated phosphatidic acid phosphatases. Wunen is a drosophila protein expressed in the central nervous system, which provides repellent activity towards primordial germ cells (PGCs), controls the ...

  2. XM_040262538.1 → XP_040118472.1  phospholipid phosphatase 1 isoform X1

    Conserved Domains (1) summary
    cd03384
    Location:99 → 244
    PAP2_wunen; PAP2, wunen subfamily. Most likely a family of membrane associated phosphatidic acid phosphatases. Wunen is a drosophila protein expressed in the central nervous system, which provides repellent activity towards primordial germ cells (PGCs), controls the ...
Nucleotide Protein
Heading Accession and Version

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