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LPCAT1 lysophosphatidylcholine acyltransferase 1 [ Oryx dammah (scimitar-horned oryx) ]

Gene ID: 120879280, updated on 21-Mar-2024

Summary

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Gene symbol
LPCAT1
Gene description
lysophosphatidylcholine acyltransferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryx dammah
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Hippotraginae; Oryx
Orthologs
human mouse all
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Genomic context

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See LPCAT1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current SCBI_Odam_1.1 (GCF_014754425.2) Unplaced Scaffold NW_024070204.1 (840920..878151, complement)

NW_024070204.1Genomic Context describing neighboring genes Neighboring gene CLPTM1 like Neighboring gene solute carrier family 6 member 3 Neighboring gene uncharacterized LOC120879282 Neighboring gene mitochondrial ribosomal protein L36

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024070204 Unplaced Scaffold Reference SCBI_Odam_1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables O-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lysophosphatidylcholine acyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryx dammah Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SCBI_Odam_1.1 Primary Assembly

Genomic

  1. NW_024070204.1 Reference SCBI_Odam_1.1 Primary Assembly

    Range
    840920..878151 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040262238.1 → XP_040118172.1  lysophosphatidylcholine acyltransferase 1

    Conserved Domains (2) summary
    cd07991
    Location:103 → 314
    LPLAT_LPCAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like
    COG5126
    Location:352 → 484
    FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]
Nucleotide Protein
Heading Accession and Version

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