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CHPF2 chondroitin polymerizing factor 2 [ Oryx dammah (scimitar-horned oryx) ]

Gene ID: 120877883, updated on 21-Mar-2024

Summary

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Gene symbol
CHPF2
Gene description
chondroitin polymerizing factor 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryx dammah
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Hippotraginae; Oryx
Orthologs
human mouse all
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Genomic context

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See CHPF2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current SCBI_Odam_1.1 (GCF_014754425.2) Unplaced Scaffold NW_024070202.1 (113663474..113671917)

NW_024070202.1Genomic Context describing neighboring genes Neighboring gene histone H2B type 2-E1 Neighboring gene ATP-binding cassette sub-family F member 2 Neighboring gene SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 Neighboring gene uncharacterized LOC120877937 Neighboring gene negative regulator of ubiquitin like proteins 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024070202 Unplaced Scaffold Reference SCBI_Odam_1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chondroitin sulfate glucuronyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryx dammah Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SCBI_Odam_1.1 Primary Assembly

Genomic

  1. NW_024070202.1 Reference SCBI_Odam_1.1 Primary Assembly

    Range
    113663474..113671917
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040260322.1 → XP_040116256.1  chondroitin sulfate glucuronyltransferase

    Conserved Domains (1) summary
    cl21608
    Location:183 → 275
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

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