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TBXAS1 thromboxane A synthase 1 [ Oryx dammah (scimitar-horned oryx) ]

Gene ID: 120877649, updated on 21-Mar-2024

Summary

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Gene symbol
TBXAS1
Gene description
thromboxane A synthase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryx dammah
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Hippotraginae; Oryx
Orthologs
human mouse all
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Genomic context

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See TBXAS1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current SCBI_Odam_1.1 (GCF_014754425.2) Unplaced Scaffold NW_024070202.1 (103319183..103488604)

NW_024070202.1Genomic Context describing neighboring genes Neighboring gene C-type lectin domain family 2 member L Neighboring gene homeodomain interacting protein kinase 2 Neighboring gene uncharacterized LOC120877647 Neighboring gene poly(ADP-ribose) polymerase family member 12 Neighboring gene lysine demethylase 7A

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024070202 Unplaced Scaffold Reference SCBI_Odam_1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables monooxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables thromboxane-A synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
thromboxane-A synthase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryx dammah Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SCBI_Odam_1.1 Primary Assembly

Genomic

  1. NW_024070202.1 Reference SCBI_Odam_1.1 Primary Assembly

    Range
    103319183..103488604
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040259992.1 → XP_040115926.1  thromboxane-A synthase

    Conserved Domains (1) summary
    COG2124
    Location:47 → 481
    CypX; Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism, Defense mechanisms]
Nucleotide Protein
Heading Accession and Version

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