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CH25H cholesterol 25-hydroxylase [ Oryx dammah (scimitar-horned oryx) ]

Gene ID: 120873795, updated on 21-Mar-2024

Summary

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Gene symbol
CH25H
Gene description
cholesterol 25-hydroxylase
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryx dammah
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Hippotraginae; Oryx
Orthologs
human mouse all
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Genomic context

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See CH25H in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current SCBI_Odam_1.1 (GCF_014754425.2) Unplaced Scaffold NW_024070198.1 (10476079..10478587, complement)

NW_024070198.1Genomic Context describing neighboring genes Neighboring gene actin alpha 2, smooth muscle Neighboring gene Fas cell surface death receptor Neighboring gene lipase A, lysosomal acid type Neighboring gene DNA fragmentation factor subunit alpha-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024070198 Unplaced Scaffold Reference SCBI_Odam_1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables C-4 methylsterol oxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables steroid hydroxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cholesterol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sterol biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cholesterol 25-hydroxylase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryx dammah Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SCBI_Odam_1.1 Primary Assembly

Genomic

  1. NW_024070198.1 Reference SCBI_Odam_1.1 Primary Assembly

    Range
    10476079..10478587 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040254713.1 → XP_040110647.1  cholesterol 25-hydroxylase

    Conserved Domains (1) summary
    COG3000
    Location:53 → 265
    ERG3; Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily [Lipid transport and metabolism]

  2. XM_040254712.1 → XP_040110646.1  cholesterol 25-hydroxylase

    Conserved Domains (1) summary
    COG3000
    Location:53 → 265
    ERG3; Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily [Lipid transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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