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ALDH5A1 aldehyde dehydrogenase 5 family member A1 [ Oryx dammah (scimitar-horned oryx) ]

Gene ID: 120870261, updated on 21-Mar-2024

Summary

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Gene symbol
ALDH5A1
Gene description
aldehyde dehydrogenase 5 family member A1
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryx dammah
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Hippotraginae; Oryx
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See ALDH5A1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current SCBI_Odam_1.1 (GCF_014754425.2) Unplaced Scaffold NW_024070195.1 (18946428..18972637)

NW_024070195.1Genomic Context describing neighboring genes Neighboring gene magnesium transporter MRS2 Neighboring gene U6 spliceosomal RNA Neighboring gene glycosylphosphatidylinositol specific phospholipase D1 Neighboring gene putative ribosome-binding factor A, mitochondrial Neighboring gene KIAA0319 ortholog Neighboring gene cytochrome c oxidase assembly factor 5-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024070195 Unplaced Scaffold Reference SCBI_Odam_1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables succinate-semialdehyde dehydrogenase (NAD+) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in gamma-aminobutyric acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
succinate-semialdehyde dehydrogenase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryx dammah Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SCBI_Odam_1.1 Primary Assembly

Genomic

  1. NW_024070195.1 Reference SCBI_Odam_1.1 Primary Assembly

    Range
    18946428..18972637
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040249885.1 → XP_040105819.1  succinate-semialdehyde dehydrogenase, mitochondrial

    Conserved Domains (1) summary
    TIGR01780
    Location:35 → 485
    SSADH; succinate-semialdehyde dehydrogenase
Nucleotide Protein
Heading Accession and Version

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