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LOC120861352 microspherule protein 1 [ Oryx dammah (scimitar-horned oryx) ]

Gene ID: 120861352, updated on 16-Nov-2023

Summary

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Gene symbol
LOC120861352
Gene description
microspherule protein 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryx dammah
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Hippotraginae; Oryx
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Genomic context

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See LOC120861352 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current SCBI_Odam_1.1 (GCF_014754425.2) Unplaced Scaffold NW_024080625.1 (21285..31075)

NW_024080625.1Genomic Context describing neighboring genes Neighboring gene protein FAM186B-like Neighboring gene potassium voltage-gated channel subfamily H member 3 Neighboring gene spermatogenesis-associated serine-rich protein 2 Neighboring gene transfer RNA glycine (anticodon UCC)

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024080625 Unplaced Scaffold Reference SCBI_Odam_1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables G-quadruplex RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Ino80 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of MLL1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of NSL complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
microspherule protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryx dammah Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SCBI_Odam_1.1 Primary Assembly

Genomic

  1. NW_024080625.1 Reference SCBI_Odam_1.1 Primary Assembly

    Range
    21285..31075
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040237001.1 → XP_040092935.1  microspherule protein 1 isoform X1

    Conserved Domains (1) summary
    cd00060
    Location:396 → 496
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...

  2. XM_040237002.1 → XP_040092936.1  microspherule protein 1 isoform X2

    Conserved Domains (1) summary
    cd00060
    Location:345 → 445
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...

  3. XM_040237003.1 → XP_040092937.1  microspherule protein 1 isoform X3

    Conserved Domains (1) summary
    cd00060
    Location:332 → 432
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
Nucleotide Protein
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