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FUT8 fucosyltransferase 8 [ Oryx dammah (scimitar-horned oryx) ]

Gene ID: 120852817, updated on 21-Mar-2024

Summary

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Gene symbol
FUT8
Gene description
fucosyltransferase 8
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryx dammah
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Hippotraginae; Oryx
Orthologs
human mouse all
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Genomic context

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See FUT8 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current SCBI_Odam_1.1 (GCF_014754425.2) Unplaced Scaffold NW_024070210.1 (25100566..25417374, complement)

NW_024070210.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120852807 Neighboring gene uncharacterized LOC120852808 Neighboring gene transfer RNA cysteine (anticodon GCA) Neighboring gene UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1-like Neighboring gene uncharacterized LOC120852835 Neighboring gene uncharacterized LOC120852834 Neighboring gene MYC associated factor X

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024070210 Unplaced Scaffold Reference SCBI_Odam_1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycoprotein 6-alpha-L-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-glycan fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-(1,6)-fucosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryx dammah Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SCBI_Odam_1.1 Primary Assembly

Genomic

  1. NW_024070210.1 Reference SCBI_Odam_1.1 Primary Assembly

    Range
    25100566..25417374 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040226276.1 → XP_040082210.1  alpha-(1,6)-fucosyltransferase

    Conserved Domains (3) summary
    cd11300
    Location:174 → 499
    Fut8_like; Alpha 1-6-fucosyltransferase
    cd11792
    Location:506 → 560
    SH3_Fut8; Src homology 3 domain of Alpha1,6-fucosyltransferase (Fut8)
    COG0013
    Location:50 → 157
    AlaS; Alanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]

  2. XM_040226277.1 → XP_040082211.1  alpha-(1,6)-fucosyltransferase

    Conserved Domains (3) summary
    cd11300
    Location:174 → 499
    Fut8_like; Alpha 1-6-fucosyltransferase
    cd11792
    Location:506 → 560
    SH3_Fut8; Src homology 3 domain of Alpha1,6-fucosyltransferase (Fut8)
    COG0013
    Location:50 → 157
    AlaS; Alanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
Heading Accession and Version

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