U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

kptn kaptin (actin binding protein) [ Gasterosteus aculeatus (three-spined stickleback) ]

Gene ID: 120822663, updated on 10-Oct-2024

Summary

Go to the top of the page Help
Gene symbol
kptn
Gene description
kaptin (actin binding protein)
See related
Ensembl:ENSGACG00000020176
Gene type
protein coding
RefSeq status
MODEL
Organism
Gasterosteus aculeatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Gasterosteales; Gasterosteidae; Gasterosteus
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See kptn in Genome Data Viewer
Location:
chromosome: 7
Exon count:
12
Annotation release Status Assembly Chr Location
100 current GAculeatus_UGA_version5 (GCF_016920845.1) 7 NC_053218.1 (15377038..15383814, complement)

Chromosome 7 - NC_053218.1Genomic Context describing neighboring genes Neighboring gene calpain small subunit 1-like Neighboring gene RNA-binding protein Nova-1-like Neighboring gene cone-rod homeobox Neighboring gene H3 histone, family 3C

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_053218.1 Chromosome 7 Reference GAculeatus_UGA_version5 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to amino acid starvation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of TORC1 signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of KICSTOR complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lamellipodium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
KICSTOR complex protein kaptin

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Gasterosteus aculeatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GAculeatus_UGA_version5 Primary Assembly

Genomic

  1. NC_053218.1 Reference GAculeatus_UGA_version5 Primary Assembly

    Range
    15377038..15383814 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040182483.1 → XP_040038417.1  KICSTOR complex protein kaptin

    UniProtKB/TrEMBL
    A0AAQ4PLA8, G3Q9T5
    Related
    ENSGACP00000061093.1, ENSGACT00000071872.1
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.