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LOC120818519 C-terminal binding protein 1 [ Gasterosteus aculeatus (three-spined stickleback) ]

Gene ID: 120818519, updated on 10-Oct-2024

Summary

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Gene symbol
LOC120818519
Gene description
C-terminal binding protein 1
See related
Ensembl:ENSGACG00000016437
Gene type
protein coding
RefSeq status
MODEL
Organism
Gasterosteus aculeatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Gasterosteales; Gasterosteidae; Gasterosteus
Orthologs
human zebrafish all
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Genomic context

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See LOC120818519 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
13
Annotation release Status Assembly Chr Location
100 current GAculeatus_UGA_version5 (GCF_016920845.1) 4 NC_053215.1 (1345311..1360961, complement)

Chromosome 4 - NC_053215.1Genomic Context describing neighboring genes Neighboring gene transmembrane emp24 domain-containing protein 11 Neighboring gene uncharacterized LOC120818276 Neighboring gene spondin 2b, extracellular matrix protein Neighboring gene macrophage erythroblast attacher, E3 ubiquitin ligase Neighboring gene heterogeneous nuclear ribonucleoprotein A0-like Neighboring gene heterogeneous nuclear ribonucleoprotein A0-like Neighboring gene kelch-like family member 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053215.1 Chromosome 4 Reference GAculeatus_UGA_version5 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-terminal-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gasterosteus aculeatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GAculeatus_UGA_version5 Primary Assembly

Genomic

  1. NC_053215.1 Reference GAculeatus_UGA_version5 Primary Assembly

    Range
    1345311..1360961 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040175650.1 → XP_040031584.1  C-terminal-binding protein 1 isoform X2

    UniProtKB/TrEMBL
    A0AAQ4RCE8
    Related
    ENSGACP00000065014.1, ENSGACT00000068448.1
    Conserved Domains (1) summary
    cd05299
    Location:9 → 327
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  2. XM_040175649.1 → XP_040031583.1  C-terminal-binding protein 1 isoform X2

    UniProtKB/TrEMBL
    A0AAQ4RCE8
    Conserved Domains (1) summary
    cd05299
    Location:9 → 327
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  3. XM_040175648.1 → XP_040031582.1  C-terminal-binding protein 1 isoform X1

    UniProtKB/TrEMBL
    A0AAQ4RCE8, G3PVR7
    Related
    ENSGACP00000068745.1, ENSGACT00000063777.1
    Conserved Domains (1) summary
    cd05299
    Location:28 → 346
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  4. XM_040175651.1 → XP_040031585.1  C-terminal-binding protein 1 isoform X3

    UniProtKB/TrEMBL
    A0AAQ4RCE8
    Conserved Domains (1) summary
    cd05299
    Location:28 → 346
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor
Nucleotide Protein Strain
Heading Accession and Version

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