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gyg2 glycogenin 2 [ Gasterosteus aculeatus (three-spined stickleback) ]

Gene ID: 120818332, updated on 12-Sep-2024

Summary

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Gene symbol
gyg2
Gene description
glycogenin 2
See related
Ensembl:ENSGACG00000015217
Gene type
protein coding
RefSeq status
MODEL
Organism
Gasterosteus aculeatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Gasterosteales; Gasterosteidae; Gasterosteus
Orthologs
human zebrafish all
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Genomic context

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See gyg2 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
10
Annotation release Status Assembly Chr Location
100 current GAculeatus_UGA_version5 (GCF_016920845.1) 1 NC_053212.1 (21446673..21458856)

Chromosome 1 - NC_053212.1Genomic Context describing neighboring genes Neighboring gene centrosomal protein 70 Neighboring gene CD99 molecule Neighboring gene matrix-remodelling associated 5a Neighboring gene protein kinase X-linked

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053212.1 Chromosome 1 Reference GAculeatus_UGA_version5 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycogenin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gasterosteus aculeatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GAculeatus_UGA_version5 Primary Assembly

Genomic

  1. NC_053212.1 Reference GAculeatus_UGA_version5 Primary Assembly

    Range
    21446673..21458856
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040175314.1 → XP_040031248.1  glycogenin-2 isoform X1

    Related
    ENSGACP00000020070.2, ENSGACT00000020109.2
    Conserved Domains (1) summary
    cd02537
    Location:4 → 243
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen

  2. XM_040175324.1 → XP_040031258.1  glycogenin-2 isoform X2

    Related
    ENSGACP00000020068.2, ENSGACT00000020107.2
    Conserved Domains (1) summary
    cd02537
    Location:4 → 243
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen

  3. XM_040175333.1 → XP_040031267.1  glycogenin-2 isoform X3

    UniProtKB/TrEMBL
    G3PR33
    Conserved Domains (1) summary
    cd02537
    Location:4 → 243
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen
Nucleotide Protein Strain
Heading Accession and Version

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