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LOC120813179 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like [ Gasterosteus aculeatus (three-spined stickleback) ]

Gene ID: 120813179, updated on 18-Jun-2024

Summary

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Gene symbol
LOC120813179
Gene description
globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like
See related
Ensembl:ENSGACG00000023274
Gene type
protein coding
RefSeq status
MODEL
Organism
Gasterosteus aculeatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Gasterosteales; Gasterosteidae; Gasterosteus
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current GAculeatus_UGA_version5 (GCF_016920845.1) Unplaced Scaffold NW_024397244.1 (12715..18642, complement)

NW_024397244.1Genomic Context describing neighboring genes Neighboring gene KIF-binding protein-like Neighboring gene uncharacterized LOC120813178 Neighboring gene mitochondrial pyruvate carrier 1-like Neighboring gene KIF-binding protein-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024397244 Unplaced Scaffold Reference GAculeatus_UGA_version5 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gasterosteus aculeatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GAculeatus_UGA_version5 Primary Assembly

Genomic

  1. NW_024397244.1 Reference GAculeatus_UGA_version5 Primary Assembly

    Range
    12715..18642 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040169266.1 → XP_040025200.1  globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like

    Related
    ENSGACP00000035343.1, ENSGACT00000050311.1
    Conserved Domains (1) summary
    cl11394
    Location:87 → 358
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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