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sgcg sarcoglycan, gamma [ Gasterosteus aculeatus (three-spined stickleback) ]

Gene ID: 120812027, updated on 18-Jun-2024

Summary

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Gene symbol
sgcg
Gene description
sarcoglycan, gamma
See related
Ensembl:ENSGACG00000006839
Gene type
protein coding
RefSeq status
MODEL
Organism
Gasterosteus aculeatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Gasterosteales; Gasterosteidae; Gasterosteus
Orthologs
human zebrafish all
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Genomic context

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See sgcg in Genome Data Viewer
Location:
chromosome: 1
Exon count:
9
Annotation release Status Assembly Chr Location
100 current GAculeatus_UGA_version5 (GCF_016920845.1) 1 NC_053212.1 (4594997..4605192)

Chromosome 1 - NC_053212.1Genomic Context describing neighboring genes Neighboring gene trafficking protein particle complex subunit 4 Neighboring gene ribosomal protein S25 Neighboring gene sacsin molecular chaperone Neighboring gene tumor necrosis factor receptor superfamily member 19-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053212.1 Chromosome 1 Reference GAculeatus_UGA_version5 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
gamma-sarcoglycan

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gasterosteus aculeatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GAculeatus_UGA_version5 Primary Assembly

Genomic

  1. NC_053212.1 Reference GAculeatus_UGA_version5 Primary Assembly

    Range
    4594997..4605192
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040167845.1 → XP_040023779.1  gamma-sarcoglycan

    UniProtKB/TrEMBL
    G3NUR1, G3NUS3
    Related
    ENSGACP00000009080.1, ENSGACT00000009100.2
    Conserved Domains (1) summary
    pfam11655
    Location:130 → 205
    DUF2589; Protein of unknown function (DUF2589)

  2. XM_040167968.1 → XP_040023902.1  gamma-sarcoglycan

    UniProtKB/TrEMBL
    G3NUR1, G3NUS3
    Conserved Domains (1) summary
    pfam11655
    Location:130 → 205
    DUF2589; Protein of unknown function (DUF2589)

  3. XM_040168107.1 → XP_040024041.1  gamma-sarcoglycan

    UniProtKB/TrEMBL
    G3NUR1, G3NUS3
    Conserved Domains (1) summary
    pfam11655
    Location:130 → 205
    DUF2589; Protein of unknown function (DUF2589)

  4. XM_040167927.1 → XP_040023861.1  gamma-sarcoglycan

    UniProtKB/TrEMBL
    G3NUR1, G3NUS3
    Conserved Domains (1) summary
    pfam11655
    Location:130 → 205
    DUF2589; Protein of unknown function (DUF2589)

  5. XM_040168040.1 → XP_040023974.1  gamma-sarcoglycan

    UniProtKB/TrEMBL
    G3NUR1, G3NUS3
    Related
    ENSGACP00000009092.2, ENSGACT00000009112.2
    Conserved Domains (1) summary
    pfam11655
    Location:130 → 205
    DUF2589; Protein of unknown function (DUF2589)
Nucleotide Protein Strain
Heading Accession and Version

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