U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

c1galt1lb core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, like b [ Xiphias gladius (swordfish) ]

Gene ID: 120807520, updated on 8-May-2024

Summary

Go to the top of the page Help
Gene symbol
c1galt1lb
Gene description
core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, like b
See related
EnsemblRapid:ENSXGLG00000012889
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphias gladius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Istiophoriformes; Xiphiidae; Xiphias
Also known as
c1galt1b
Orthologs
zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See c1galt1lb in Genome Data Viewer
Location:
chromosome: 21
Exon count:
4
Annotation release Status Assembly Chr Location
100 current ASM1685928v1 (GCF_016859285.1) 21 NC_053420.1 (18406104..18413747)

Chromosome 21 - NC_053420.1Genomic Context describing neighboring genes Neighboring gene beta-1,4-N-acetyl-galactosaminyl transferase 1b Neighboring gene OS9 endoplasmic reticulum lectin Neighboring gene apolipoprotein F Neighboring gene signal transducer and activator of transcription 2

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_053420.1 Chromosome 21 Reference ASM1685928v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing, core 1 IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-B
Names
core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1b

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Xiphias gladius Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1685928v1 Primary Assembly

Genomic

  1. NC_053420.1 Reference ASM1685928v1 Primary Assembly

    Range
    18406104..18413747
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040159680.1 → XP_040015614.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-B isoform X1

    Related
    ENSXGLP00000038165.1, ENSXGLT00000039001.1
    Conserved Domains (1) summary
    cl21608
    Location:166 → 250
    Galactosyl_T; Galactosyltransferase

  2. XM_040159681.1 → XP_040015615.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-B isoform X2

    Conserved Domains (1) summary
    cl21608
    Location:146 → 230
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases