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LOC120805492 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4-like [ Xiphias gladius (swordfish) ]

Gene ID: 120805492, updated on 8-May-2024

Summary

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Gene symbol
LOC120805492
Gene description
beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4-like
See related
EnsemblRapid:ENSXGLG00000017740
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphias gladius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Istiophoriformes; Xiphiidae; Xiphias
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Genomic context

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See LOC120805492 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
3
Annotation release Status Assembly Chr Location
100 current ASM1685928v1 (GCF_016859285.1) 19 NC_053418.1 (29703901..29706965, complement)

Chromosome 19 - NC_053418.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120805033 Neighboring gene A-kinase anchor protein 12-like Neighboring gene 3-hydroxy-3-methylglutaryl-CoA reductase a Neighboring gene frataxin

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053418.1 Chromosome 19 Reference ASM1685928v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphias gladius Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1685928v1 Primary Assembly

Genomic

  1. NC_053418.1 Reference ASM1685928v1 Primary Assembly

    Range
    29703901..29706965 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040155763.1 → XP_040011697.1  beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4-like

    Related
    ENSXGLP00000052101.1, ENSXGLT00000053608.1
    Conserved Domains (1) summary
    cl27418
    Location:140 → 307
    Branch; Core-2/I-Branching enzyme

  2. XM_040155762.1 → XP_040011696.1  beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4-like

    Related
    ENSXGLP00000052100.1, ENSXGLT00000053605.1
    Conserved Domains (1) summary
    cl27418
    Location:140 → 307
    Branch; Core-2/I-Branching enzyme
Nucleotide Protein
Heading Accession and Version

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