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cog5 component of oligomeric golgi complex 5 [ Xiphias gladius (swordfish) ]

Gene ID: 120803010, updated on 8-May-2024

Summary

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Gene symbol
cog5
Gene description
component of oligomeric golgi complex 5
See related
EnsemblRapid:ENSXGLG00000009738
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphias gladius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Istiophoriformes; Xiphiidae; Xiphias
Orthologs
human zebrafish all
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Genomic context

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See cog5 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
23
Annotation release Status Assembly Chr Location
100 current ASM1685928v1 (GCF_016859285.1) 2 NC_053401.1 (18720025..18801352)

Chromosome 2 - NC_053401.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein RFP-like Neighboring gene zinc-binding protein A33-like Neighboring gene G-protein coupled receptor 22-like Neighboring gene uncharacterized LOC120803052 Neighboring gene pleckstrin homology domain-containing family A member 5-like Neighboring gene NADH:ubiquinone oxidoreductase subunit A5 Neighboring gene AE binding protein 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053401.1 Chromosome 2 Reference ASM1685928v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in intra-Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Golgi transport complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
conserved oligomeric Golgi complex subunit 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphias gladius Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1685928v1 Primary Assembly

Genomic

  1. NC_053401.1 Reference ASM1685928v1 Primary Assembly

    Range
    18720025..18801352
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040151272.1 → XP_040007206.1  conserved oligomeric Golgi complex subunit 5 isoform X1

    Related
    ENSXGLP00000028853.1, ENSXGLT00000029433.1
    Conserved Domains (1) summary
    pfam10392
    Location:20 → 142
    COG5; Golgi transport complex subunit 5

  2. XM_040151280.1 → XP_040007214.1  conserved oligomeric Golgi complex subunit 5 isoform X2

    Related
    ENSXGLP00000028862.1, ENSXGLT00000029442.1
    Conserved Domains (1) summary
    pfam10392
    Location:20 → 142
    COG5; Golgi transport complex subunit 5
Nucleotide Protein
Heading Accession and Version

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