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LOC120801467 GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like [ Xiphias gladius (swordfish) ]

Gene ID: 120801467, updated on 18-Sep-2024

Summary

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Gene symbol
LOC120801467
Gene description
GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like
See related
EnsemblRapid:ENSXGLG00000012144
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphias gladius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Istiophoriformes; Xiphiidae; Xiphias
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Genomic context

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See LOC120801467 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
6
Annotation release Status Assembly Chr Location
100 current ASM1685928v1 (GCF_016859285.1) 16 NC_053415.1 (27492966..27499519, complement)

Chromosome 16 - NC_053415.1Genomic Context describing neighboring genes Neighboring gene integral membrane protein 2B-like Neighboring gene serine/threonine-protein kinase Nek5-like Neighboring gene lymphocyte cytosolic protein 1 (L-plastin) Neighboring gene CCR4-NOT transcription complex, subunit 11 Neighboring gene excitatory amino acid transporter 3-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053415.1 Chromosome 16 Reference ASM1685928v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GDP-Man:Man3GlcNAc2-PP-Dol alpha-1,2-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphias gladius Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1685928v1 Primary Assembly

Genomic

  1. NC_053415.1 Reference ASM1685928v1 Primary Assembly

    Range
    27492966..27499519 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040148523.1 → XP_040004457.1  GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like

    Related
    ENSXGLP00000035946.1, ENSXGLT00000036687.1
    Conserved Domains (1) summary
    cd03806
    Location:65 → 515
    GT4_ALG11-like; alpha-1,2-mannosyltransferase ALG11 and similar proteins
Nucleotide Protein
Heading Accession and Version

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