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kirrel1b kirre like nephrin family adhesion molecule 1b [ Xiphias gladius (swordfish) ]

Gene ID: 120799350, updated on 8-May-2024

Summary

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Gene symbol
kirrel1b
Gene description
kirre like nephrin family adhesion molecule 1b
See related
EnsemblRapid:ENSXGLG00000017370
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphias gladius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Istiophoriformes; Xiphiidae; Xiphias
Orthologs
zebrafish all
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Genomic context

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See kirrel1b in Genome Data Viewer
Location:
chromosome: 14
Exon count:
15
Annotation release Status Assembly Chr Location
100 current ASM1685928v1 (GCF_016859285.1) 14 NC_053413.1 (23220119..23294690, complement)

Chromosome 14 - NC_053413.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120799187 Neighboring gene CD48 antigen-like Neighboring gene cell adhesion molecule 3 Neighboring gene transfer RNA arginine (anticodon UCU)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053413.1 Chromosome 14 Reference ASM1685928v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kin of IRRE-like protein 1b

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphias gladius Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1685928v1 Primary Assembly

Genomic

  1. NC_053413.1 Reference ASM1685928v1 Primary Assembly

    Range
    23220119..23294690 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040144462.1 → XP_040000396.1  kin of IRRE-like protein 1b

    Related
    ENSXGLP00000051443.1, ENSXGLT00000052812.1
    Conserved Domains (6) summary
    smart00408
    Location:134 → 204
    IGc2; Immunoglobulin C-2 Type
    smart00409
    Location:312 → 387
    IG; Immunoglobulin
    smart00410
    Location:229 → 302
    IG_like; Immunoglobulin like
    PHA03378
    Location:608 → 711
    PHA03378; EBNA-3B; Provisional
    cd00096
    Location:390 → 394
    Ig; Ig strand A [structural motif]
    cl11960
    Location:389 → 492
    Ig; Immunoglobulin domain
Nucleotide Protein
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Molecular Biology Databases