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alg12 ALG12 alpha-1,6-mannosyltransferase [ Xiphias gladius (swordfish) ]

Gene ID: 120798037, updated on 8-May-2024

Summary

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Gene symbol
alg12
Gene description
ALG12 alpha-1,6-mannosyltransferase
See related
EnsemblRapid:ENSXGLG00000012826
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphias gladius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Istiophoriformes; Xiphiidae; Xiphias
Orthologs
human zebrafish all
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Genomic context

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See alg12 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
10
Annotation release Status Assembly Chr Location
100 current ASM1685928v1 (GCF_016859285.1) 2 NC_053401.1 (13796670..13801191)

Chromosome 2 - NC_053401.1Genomic Context describing neighboring genes Neighboring gene interleukin 17 receptor E-like Neighboring gene Pim-3 proto-oncogene, serine/threonine kinase Neighboring gene cysteine-rich with EGF-like domains 2 Neighboring gene transfer RNA glutamic acid (anticodon CUC) Neighboring gene zinc finger, BED-type containing 4 Neighboring gene bromodomain containing 1a Neighboring gene chemokine-like protein TAFA-5

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053401.1 Chromosome 2 Reference ASM1685928v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphias gladius Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1685928v1 Primary Assembly

Genomic

  1. NC_053401.1 Reference ASM1685928v1 Primary Assembly

    Range
    13796670..13801191
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040142011.1 → XP_039997945.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X4

    Conserved Domains (1) summary
    cl21590
    Location:122 → 310
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  2. XM_040141982.1 → XP_039997916.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X1

    Related
    ENSXGLP00000037984.1, ENSXGLT00000038820.1
    Conserved Domains (1) summary
    cl21590
    Location:30 → 368
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  3. XM_040141991.1 → XP_039997925.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X2

    Conserved Domains (1) summary
    cl21590
    Location:34 → 329
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  4. XM_040142000.1 → XP_039997934.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X3

    Conserved Domains (1) summary
    cl21590
    Location:26 → 321
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
Nucleotide Protein
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