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large2 LARGE xylosyl- and glucuronyltransferase 2 [ Xiphias gladius (swordfish) ]

Gene ID: 120796271, updated on 8-May-2024

Summary

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Gene symbol
large2
Gene description
LARGE xylosyl- and glucuronyltransferase 2
See related
EnsemblRapid:ENSXGLG00000001862
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphias gladius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Istiophoriformes; Xiphiidae; Xiphias
Orthologs
zebrafish all
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Genomic context

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See large2 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
16
Annotation release Status Assembly Chr Location
100 current ASM1685928v1 (GCF_016859285.1) 1 NC_053400.1 (34007151..34093359)

Chromosome 1 - NC_053400.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120798190 Neighboring gene uncharacterized LOC120792280 Neighboring gene nuclear receptor ROR-alpha A-like Neighboring gene transfer RNA valine (anticodon UAC) Neighboring gene transfer RNA valine (anticodon UAC)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053400.1 Chromosome 1 Reference ASM1685928v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LARGE xylosyl- and glucuronyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphias gladius Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1685928v1 Primary Assembly

Genomic

  1. NC_053400.1 Reference ASM1685928v1 Primary Assembly

    Range
    34007151..34093359
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040138905.1 → XP_039994839.1  LARGE xylosyl- and glucuronyltransferase 2

    Related
    ENSXGLP00000004938.1, ENSXGLT00000005221.1
    Conserved Domains (2) summary
    cd06431
    Location:132 → 411
    GT8_LARGE_C; LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis
    cl21462
    Location:50 → 80
    bZIP; Basic leucine zipper (bZIP) domain of bZIP transcription factors: a DNA-binding and dimerization domain
Nucleotide Protein
Heading Accession and Version

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