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xxylt1 xyloside xylosyltransferase 1 [ Xiphias gladius (swordfish) ]

Gene ID: 120791269, updated on 8-May-2024

Summary

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Gene symbol
xxylt1
Gene description
xyloside xylosyltransferase 1
See related
EnsemblRapid:ENSXGLG00000007916
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphias gladius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Istiophoriformes; Xiphiidae; Xiphias
Orthologs
human zebrafish all
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Genomic context

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See xxylt1 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
7
Annotation release Status Assembly Chr Location
100 current ASM1685928v1 (GCF_016859285.1) 6 NC_053405.1 (14185695..14221624, complement)

Chromosome 6 - NC_053405.1Genomic Context describing neighboring genes Neighboring gene large 60S subunit nuclear export GTPase 1 Neighboring gene family with sequence similarity 43 member A Neighboring gene serine/arginine-rich splicing factor 11-like Neighboring gene ankyrin repeat domain-containing protein 13C Neighboring gene uncharacterized LOC120791030 Neighboring gene cystathionase (cystathionine gamma-lyase)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053405.1 Chromosome 6 Reference ASM1685928v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
xyloside xylosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphias gladius Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1685928v1 Primary Assembly

Genomic

  1. NC_053405.1 Reference ASM1685928v1 Primary Assembly

    Range
    14185695..14221624 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040129600.1 → XP_039985534.1  xyloside xylosyltransferase 1 isoform X2

    Conserved Domains (1) summary
    cl11394
    Location:79 → 236
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  2. XM_040129598.1 → XP_039985532.1  xyloside xylosyltransferase 1 isoform X1

    Related
    ENSXGLP00000022608.1, ENSXGLT00000023152.1
    Conserved Domains (1) summary
    cl11394
    Location:131 → 367
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  3. XM_040129599.1 → XP_039985533.1  xyloside xylosyltransferase 1 isoform X1

    Conserved Domains (1) summary
    cl11394
    Location:131 → 367
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  4. XM_040129597.1 → XP_039985531.1  xyloside xylosyltransferase 1 isoform X1

    Conserved Domains (1) summary
    cl11394
    Location:131 → 367
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
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