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b3galt2 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2 [ Xiphias gladius (swordfish) ]

Gene ID: 120791176, updated on 8-May-2024

Summary

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Gene symbol
b3galt2
Gene description
UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2
See related
EnsemblRapid:ENSXGLG00000008247
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphias gladius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Istiophoriformes; Xiphiidae; Xiphias
Orthologs
zebrafish all
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Genomic context

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See b3galt2 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
7
Annotation release Status Assembly Chr Location
100 current ASM1685928v1 (GCF_016859285.1) 6 NC_053405.1 (4894092..4907875, complement)

Chromosome 6 - NC_053405.1Genomic Context describing neighboring genes Neighboring gene ubiquitin carboxyl-terminal hydrolase L5 Neighboring gene glutaredoxin 2 Neighboring gene uncharacterized LOC120791124 Neighboring gene complement factor H-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053405.1 Chromosome 6 Reference ASM1685928v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-galactosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphias gladius Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1685928v1 Primary Assembly

Genomic

  1. NC_053405.1 Reference ASM1685928v1 Primary Assembly

    Range
    4894092..4907875 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040129407.1 → XP_039985341.1  beta-1,3-galactosyltransferase 2

    Conserved Domains (1) summary
    pfam01762
    Location:179 → 373
    Galactosyl_T; Galactosyltransferase

  2. XM_040129406.1 → XP_039985340.1  beta-1,3-galactosyltransferase 2

    Conserved Domains (1) summary
    pfam01762
    Location:179 → 373
    Galactosyl_T; Galactosyltransferase

  3. XM_040129404.1 → XP_039985338.1  beta-1,3-galactosyltransferase 2

    Conserved Domains (1) summary
    pfam01762
    Location:179 → 373
    Galactosyl_T; Galactosyltransferase

  4. XM_040129399.1 → XP_039985333.1  beta-1,3-galactosyltransferase 2

    Related
    ENSXGLP00000023673.1, ENSXGLT00000024224.1
    Conserved Domains (1) summary
    pfam01762
    Location:179 → 373
    Galactosyl_T; Galactosyltransferase

  5. XM_040129405.1 → XP_039985339.1  beta-1,3-galactosyltransferase 2

    Related
    ENSXGLP00000023670.1, ENSXGLT00000024221.1
    Conserved Domains (1) summary
    pfam01762
    Location:179 → 373
    Galactosyl_T; Galactosyltransferase

  6. XM_040129401.1 → XP_039985335.1  beta-1,3-galactosyltransferase 2

    Related
    ENSXGLP00000023669.1, ENSXGLT00000024220.1
    Conserved Domains (1) summary
    pfam01762
    Location:179 → 373
    Galactosyl_T; Galactosyltransferase

  7. XM_040129400.1 → XP_039985334.1  beta-1,3-galactosyltransferase 2

    Related
    ENSXGLP00000023672.1, ENSXGLT00000024223.1
    Conserved Domains (1) summary
    pfam01762
    Location:179 → 373
    Galactosyl_T; Galactosyltransferase

  8. XM_040129408.1 → XP_039985342.1  beta-1,3-galactosyltransferase 2

    Related
    ENSXGLP00000023666.1, ENSXGLT00000024217.1
    Conserved Domains (1) summary
    pfam01762
    Location:179 → 373
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

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