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chst14 carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14 [ Xiphias gladius (swordfish) ]

Gene ID: 120790988, updated on 8-May-2024

Summary

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Gene symbol
chst14
Gene description
carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14
See related
EnsemblRapid:ENSXGLG00000011065
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphias gladius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Istiophoriformes; Xiphiidae; Xiphias
Orthologs
human zebrafish all
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Genomic context

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See chst14 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
4
Annotation release Status Assembly Chr Location
100 current ASM1685928v1 (GCF_016859285.1) 6 NC_053405.1 (23025303..23027788)

Chromosome 6 - NC_053405.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120791275 Neighboring gene aminoadipate-semialdehyde dehydrogenase Neighboring gene capping protein inhibiting regulator of actin dynamics Neighboring gene centrosomal protein 135 Neighboring gene exocyst complex component 1 Neighboring gene neuromedin U

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053405.1 Chromosome 6 Reference ASM1685928v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in dermatan sulfate proteoglycan metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 14

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphias gladius Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1685928v1 Primary Assembly

Genomic

  1. NC_053405.1 Reference ASM1685928v1 Primary Assembly

    Range
    23025303..23027788
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040129048.1 → XP_039984982.1  carbohydrate sulfotransferase 14 isoform X1

    Related
    ENSXGLP00000032696.1, ENSXGLT00000033320.1

  2. XM_040129049.1 → XP_039984983.1  carbohydrate sulfotransferase 14 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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