U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

chst2b carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2b [ Xiphias gladius (swordfish) ]

Gene ID: 120790161, updated on 8-May-2024

Summary

Go to the top of the page Help
Gene symbol
chst2b
Gene description
carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2b
See related
EnsemblRapid:ENSXGLG00000014459
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphias gladius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Istiophoriformes; Xiphiidae; Xiphias
Orthologs
zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See chst2b in Genome Data Viewer
Location:
chromosome: 5
Exon count:
1
Annotation release Status Assembly Chr Location
100 current ASM1685928v1 (GCF_016859285.1) 5 NC_053404.1 (14837206..14841203, complement)

Chromosome 5 - NC_053404.1Genomic Context describing neighboring genes Neighboring gene divergent protein kinase domain 2Ab Neighboring gene sodium/hydrogen exchanger 9-like Neighboring gene transient receptor potential cation channel, subfamily C, member 1 Neighboring gene procollagen C-endopeptidase enhancer 2b Neighboring gene U2 snRNP-associated SURP domain containing

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_053404.1 Chromosome 5 Reference ASM1685928v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylglucosamine 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sulfur compound metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
carbohydrate sulfotransferase 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Xiphias gladius Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1685928v1 Primary Assembly

Genomic

  1. NC_053404.1 Reference ASM1685928v1 Primary Assembly

    Range
    14837206..14841203 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040127511.1 → XP_039983445.1  carbohydrate sulfotransferase 2

    Related
    ENSXGLP00000042817.1, ENSXGLT00000043842.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases