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LOC120789107 solute carrier family 25 member 29 [ Xiphias gladius (swordfish) ]

Gene ID: 120789107, updated on 25-Sep-2024

Summary

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Gene symbol
LOC120789107
Gene description
solute carrier family 25 member 29
See related
EnsemblRapid:ENSXGLG00000006296
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphias gladius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Istiophoriformes; Xiphiidae; Xiphias
Also known as
slc25a29
Orthologs
human zebrafish all
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Genomic context

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See LOC120789107 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
6
Annotation release Status Assembly Chr Location
100 current ASM1685928v1 (GCF_016859285.1) 4 NC_053403.1 (16368472..16378302, complement)

Chromosome 4 - NC_053403.1Genomic Context describing neighboring genes Neighboring gene synapse differentiation inducing 1-like Neighboring gene vertebrae development associated Neighboring gene solute carrier family 25 member 47a Neighboring gene thyroxine 5-deiodinase-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053403.1 Chromosome 4 Reference ASM1685928v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables high-affinity L-arginine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial L-ornithine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial basic amino acids transporter

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphias gladius Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1685928v1 Primary Assembly

Genomic

  1. NC_053403.1 Reference ASM1685928v1 Primary Assembly

    Range
    16368472..16378302 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040125611.1 → XP_039981545.1  mitochondrial basic amino acids transporter isoform X1

    Related
    ENSXGLP00000017650.1, ENSXGLT00000018134.1
    Conserved Domains (2) summary
    PTZ00168
    Location:91 → 288
    PTZ00168; mitochondrial carrier protein; Provisional
    PTZ00169
    Location:5 → 181
    PTZ00169; ADP/ATP transporter on adenylate translocase; Provisional

  2. XM_040125614.1 → XP_039981548.1  mitochondrial basic amino acids transporter isoform X2

    Conserved Domains (1) summary
    PTZ00169
    Location:31 → 189
    PTZ00169; ADP/ATP transporter on adenylate translocase; Provisional

  3. XM_040125612.1 → XP_039981546.1  mitochondrial basic amino acids transporter isoform X2

    Conserved Domains (1) summary
    PTZ00169
    Location:31 → 189
    PTZ00169; ADP/ATP transporter on adenylate translocase; Provisional
Nucleotide Protein
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