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LOC120788188 xylosyltransferase 1-like [ Xiphias gladius (swordfish) ]

Gene ID: 120788188, updated on 8-May-2024

Summary

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Gene symbol
LOC120788188
Gene description
xylosyltransferase 1-like
See related
EnsemblRapid:ENSXGLG00000002886
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphias gladius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Istiophoriformes; Xiphiidae; Xiphias
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Genomic context

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See LOC120788188 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
12
Annotation release Status Assembly Chr Location
100 current ASM1685928v1 (GCF_016859285.1) 3 NC_053402.1 (24282787..24319660)

Chromosome 3 - NC_053402.1Genomic Context describing neighboring genes Neighboring gene RAB40c, member RAS oncogene family Neighboring gene gastrula zinc finger protein XlCGF57.1-like Neighboring gene uncharacterized LOC120788192 Neighboring gene K(lysine) acetyltransferase 8 Neighboring gene ring finger protein 25

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053402.1 Chromosome 3 Reference ASM1685928v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heparan sulfate proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
xylosyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphias gladius Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1685928v1 Primary Assembly

Genomic

  1. NC_053402.1 Reference ASM1685928v1 Primary Assembly

    Range
    24282787..24319660
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040123758.1 → XP_039979692.1  xylosyltransferase 1-like isoform X1

    Related
    ENSXGLP00000007454.1, ENSXGLT00000007765.1
    Conserved Domains (1) summary
    cl27418
    Location:309 → 522
    Branch; Core-2/I-Branching enzyme

  2. XM_040123759.1 → XP_039979693.1  xylosyltransferase 1-like isoform X2

    Related
    ENSXGLP00000007461.1, ENSXGLT00000007772.1
    Conserved Domains (1) summary
    cl27418
    Location:309 → 590
    Branch; Core-2/I-Branching enzyme
Nucleotide Protein
Heading Accession and Version

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