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The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference ASM1685928v1 Primary Assembly
Genomic
-
NC_053423.1 Reference ASM1685928v1 Primary Assembly
- Range
-
20721375..20832586 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_040122434.1 → XP_039978368.1 plectin a isoform X2
- Related
- ENSXGLP00000014281.1, ENSXGLT00000014729.1
- Conserved Domains (6) summary
-
- PTZ00121
Location:1502 → 2236
- PTZ00121; MAEBL; Provisional
- smart00150
Location:685 → 779
- SPEC; Spectrin repeats
- smart00250
Location:4471 → 4508
- PLEC; Plectin repeat
- COG5069
Location:194 → 416
- SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
- cd00176
Location:780 → 970
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- pfam02463
Location:1078 → 1877
- SMC_N; RecF/RecN/SMC N terminal domain
-
XM_040122433.1 → XP_039978367.1 plectin a isoform X1
- Conserved Domains (6) summary
-
- PTZ00121
Location:1509 → 2243
- PTZ00121; MAEBL; Provisional
- smart00150
Location:685 → 779
- SPEC; Spectrin repeats
- smart00250
Location:4478 → 4515
- PLEC; Plectin repeat
- COG0419
Location:1198 → 1742
- SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
- COG5069
Location:194 → 416
- SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
- cd00176
Location:780 → 970
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
-
XM_040122438.1 → XP_039978372.1 plectin a isoform X6
- Related
- ENSXGLP00000014234.1, ENSXGLT00000014682.1
- Conserved Domains (6) summary
-
- PTZ00121
Location:1345 → 2079
- PTZ00121; MAEBL; Provisional
- smart00150
Location:521 → 615
- SPEC; Spectrin repeats
- smart00250
Location:4314 → 4351
- PLEC; Plectin repeat
- COG0419
Location:1034 → 1578
- SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
- COG5069
Location:35 → 252
- SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
- cd00176
Location:616 → 806
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
-
XM_040122443.1 → XP_039978377.1 plectin a isoform X11
- Conserved Domains (6) summary
-
- PTZ00121
Location:1296 → 2030
- PTZ00121; MAEBL; Provisional
- smart00150
Location:472 → 566
- SPEC; Spectrin repeats
- smart00250
Location:4265 → 4302
- PLEC; Plectin repeat
- COG0419
Location:985 → 1529
- SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
- COG5069
Location:2 → 203
- SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
- cd00176
Location:567 → 757
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
-
XM_040122441.1 → XP_039978375.1 plectin a isoform X9
- Related
- ENSXGLP00000014104.1, ENSXGLT00000014551.1
- Conserved Domains (6) summary
-
- PTZ00121
Location:1328 → 2062
- PTZ00121; MAEBL; Provisional
- smart00150
Location:504 → 598
- SPEC; Spectrin repeats
- smart00250
Location:4297 → 4334
- PLEC; Plectin repeat
- COG0419
Location:1017 → 1561
- SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
- COG5069
Location:13 → 235
- SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
- cd00176
Location:599 → 789
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
-
XM_040122439.1 → XP_039978373.1 plectin a isoform X7
- Related
- ENSXGLP00000013857.1, ENSXGLT00000014304.1
- Conserved Domains (6) summary
-
- PTZ00121
Location:1342 → 2076
- PTZ00121; MAEBL; Provisional
- smart00150
Location:525 → 619
- SPEC; Spectrin repeats
- smart00250
Location:4311 → 4348
- PLEC; Plectin repeat
- COG5069
Location:39 → 256
- SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
- cd00176
Location:620 → 810
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- pfam02463
Location:918 → 1717
- SMC_N; RecF/RecN/SMC N terminal domain
-
XM_040122436.1 → XP_039978370.1 plectin a isoform X4
- Conserved Domains (6) summary
-
- PTZ00121
Location:1349 → 2083
- PTZ00121; MAEBL; Provisional
- smart00150
Location:525 → 619
- SPEC; Spectrin repeats
- smart00250
Location:4318 → 4355
- PLEC; Plectin repeat
- COG0419
Location:1038 → 1582
- SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
- COG5069
Location:39 → 256
- SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
- cd00176
Location:620 → 810
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
-
XM_040122442.1 → XP_039978376.1 plectin a isoform X10
- Related
- ENSXGLP00000013840.1, ENSXGLT00000014287.1
- Conserved Domains (6) summary
-
- PTZ00121
Location:1325 → 2059
- PTZ00121; MAEBL; Provisional
- smart00150
Location:508 → 602
- SPEC; Spectrin repeats
- smart00250
Location:4294 → 4331
- PLEC; Plectin repeat
- COG5069
Location:17 → 239
- SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
- cd00176
Location:603 → 793
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- pfam02463
Location:901 → 1700
- SMC_N; RecF/RecN/SMC N terminal domain
-
XM_040122440.1 → XP_039978374.1 plectin a isoform X8
- Conserved Domains (6) summary
-
- PTZ00121
Location:1332 → 2066
- PTZ00121; MAEBL; Provisional
- smart00150
Location:508 → 602
- SPEC; Spectrin repeats
- smart00250
Location:4301 → 4338
- PLEC; Plectin repeat
- COG0419
Location:1021 → 1565
- SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
- COG5069
Location:17 → 239
- SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
- cd00176
Location:603 → 793
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
-
XM_040122435.1 → XP_039978369.1 plectin a isoform X3
- Conserved Domains (6) summary
-
- PTZ00121
Location:1353 → 2087
- PTZ00121; MAEBL; Provisional
- smart00150
Location:529 → 623
- SPEC; Spectrin repeats
- smart00250
Location:4322 → 4359
- PLEC; Plectin repeat
- COG0419
Location:1042 → 1586
- SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
- COG5069
Location:43 → 260
- SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
- cd00176
Location:624 → 814
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
-
XM_040122437.1 → XP_039978371.1 plectin a isoform X5
- Related
- ENSXGLP00000013829.1, ENSXGLT00000014275.1
- Conserved Domains (6) summary
-
- PTZ00121
Location:1346 → 2080
- PTZ00121; MAEBL; Provisional
- smart00150
Location:529 → 623
- SPEC; Spectrin repeats
- smart00250
Location:4315 → 4352
- PLEC; Plectin repeat
- COG5069
Location:43 → 260
- SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
- cd00176
Location:624 → 814
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- pfam02463
Location:922 → 1721
- SMC_N; RecF/RecN/SMC N terminal domain