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hs6st2 heparan sulfate 6-O-sulfotransferase 2 [ Xiphias gladius (swordfish) ]

Gene ID: 120785799, updated on 8-May-2024

Summary

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Gene symbol
hs6st2
Gene description
heparan sulfate 6-O-sulfotransferase 2
See related
EnsemblRapid:ENSXGLG00000008954
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphias gladius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Istiophoriformes; Xiphiidae; Xiphias
Orthologs
zebrafish all
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Genomic context

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See hs6st2 in Genome Data Viewer
Location:
chromosome: 23
Exon count:
3
Annotation release Status Assembly Chr Location
100 current ASM1685928v1 (GCF_016859285.1) 23 NC_053422.1 (12960983..12964228, complement)

Chromosome 23 - NC_053422.1Genomic Context describing neighboring genes Neighboring gene RAP2C, member of RAS oncogene family Neighboring gene muscleblind-like splicing regulator 3 Neighboring gene transfer RNA phenylalanine (anticodon GAA) Neighboring gene uncharacterized LOC120784913

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053422.1 Chromosome 23 Reference ASM1685928v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heparan sulfate 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, enzymatic modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan-sulfate 6-O-sulfotransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphias gladius Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1685928v1 Primary Assembly

Genomic

  1. NC_053422.1 Reference ASM1685928v1 Primary Assembly

    Range
    12960983..12964228 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040120740.1 → XP_039976674.1  heparan-sulfate 6-O-sulfotransferase 2 isoform X1

    Related
    ENSXGLP00000025867.1, ENSXGLT00000026434.1

  2. XM_040120741.1 → XP_039976675.1  heparan-sulfate 6-O-sulfotransferase 2 isoform X2

    Conserved Domains (1) summary
    cl22970
    Location:107 → 367
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

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