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LOC120785384 beta-1,3-galactosyltransferase 2-like [ Xiphias gladius (swordfish) ]

Gene ID: 120785384, updated on 8-May-2024

Summary

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Gene symbol
LOC120785384
Gene description
beta-1,3-galactosyltransferase 2-like
See related
EnsemblRapid:ENSXGLG00000001137
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphias gladius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Istiophoriformes; Xiphiidae; Xiphias
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Genomic context

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See LOC120785384 in Genome Data Viewer
Location:
chromosome: 23
Exon count:
4
Annotation release Status Assembly Chr Location
100 current ASM1685928v1 (GCF_016859285.1) 23 NC_053422.1 (23535364..23544749, complement)

Chromosome 23 - NC_053422.1Genomic Context describing neighboring genes Neighboring gene misshapen-like kinase 1 Neighboring gene myotilin Neighboring gene interleukin 1 receptor accessory protein-like 2 Neighboring gene homeodomain-interacting protein kinase 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053422.1 Chromosome 23 Reference ASM1685928v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-galactosyltransferase 1-like; beta-1,3-galactosyltransferase 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphias gladius Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1685928v1 Primary Assembly

Genomic

  1. NC_053422.1 Reference ASM1685928v1 Primary Assembly

    Range
    23535364..23544749 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040120068.1 → XP_039976002.1  beta-1,3-galactosyltransferase 1-like isoform X1

    Related
    ENSXGLP00000002412.1, ENSXGLT00000002677.1
    Conserved Domains (1) summary
    cl21608
    Location:117 → 310
    Galactosyl_T; Galactosyltransferase

  2. XM_040120069.1 → XP_039976003.1  beta-1,3-galactosyltransferase 2-like isoform X2

    Conserved Domains (1) summary
    cl21608
    Location:49 → 242
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
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Molecular Biology Databases