U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC120785277 C-terminal binding protein 1 [ Xiphias gladius (swordfish) ]

Gene ID: 120785277, updated on 8-May-2024

Summary

Go to the top of the page Help
Gene symbol
LOC120785277
Gene description
C-terminal binding protein 1
See related
EnsemblRapid:ENSXGLG00000001578
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphias gladius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Istiophoriformes; Xiphiidae; Xiphias
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC120785277 in Genome Data Viewer
Location:
chromosome: 23
Exon count:
15
Annotation release Status Assembly Chr Location
100 current ASM1685928v1 (GCF_016859285.1) 23 NC_053422.1 (8357716..8392905)

Chromosome 23 - NC_053422.1Genomic Context describing neighboring genes Neighboring gene heterogeneous nuclear ribonucleoprotein A0-like Neighboring gene heterogeneous nuclear ribonucleoprotein A0-like Neighboring gene macrophage erythroblast attacher, E3 ubiquitin ligase Neighboring gene transmembrane emp24 domain-containing protein 11 Neighboring gene uncharacterized LOC120785283 Neighboring gene spondin 2b, extracellular matrix protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_053422.1 Chromosome 23 Reference ASM1685928v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
C-terminal-binding protein 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Xiphias gladius Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1685928v1 Primary Assembly

Genomic

  1. NC_053422.1 Reference ASM1685928v1 Primary Assembly

    Range
    8357716..8392905
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040119858.1 → XP_039975792.1  C-terminal-binding protein 1 isoform X3

    Conserved Domains (1) summary
    cd05299
    Location:9 → 327
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  2. XM_040119859.1 → XP_039975793.1  C-terminal-binding protein 1 isoform X3

    Related
    ENSXGLP00000004062.1, ENSXGLT00000004327.1
    Conserved Domains (1) summary
    cd05299
    Location:9 → 327
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  3. XM_040119857.1 → XP_039975791.1  C-terminal-binding protein 1 isoform X2

    Conserved Domains (1) summary
    cd05299
    Location:17 → 335
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  4. XM_040119856.1 → XP_039975790.1  C-terminal-binding protein 1 isoform X1

    Related
    ENSXGLP00000004075.1, ENSXGLT00000004340.1
    Conserved Domains (1) summary
    cd05299
    Location:28 → 346
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  5. XM_040119860.1 → XP_039975794.1  C-terminal-binding protein 1 isoform X4

    Conserved Domains (1) summary
    cd05299
    Location:28 → 340
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases