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CTU2 cytosolic thiouridylase subunit 2 [ Hirundo rustica (Barn swallow) ]

Gene ID: 120766113, updated on 3-Aug-2024

Summary

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Gene symbol
CTU2
Gene description
cytosolic thiouridylase subunit 2
See related
EnsemblRapid:ENSHRRG00010020864
Gene type
protein coding
RefSeq status
MODEL
Organism
Hirundo rustica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Hirundinidae; Hirundo
Orthologs
human mouse all
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Genomic context

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See CTU2 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_07 current bHirRus1.pri.v3 (GCF_015227805.2) 11 Unlocalized Scaffold NW_026690180.1 (27..3837)

NW_026690180.1Genomic Context describing neighboring genes Neighboring gene piezo type mechanosensitive ion channel component 1 (Er blood group) Neighboring gene chromatin licensing and DNA replication factor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026690180 Chromosome 11 Unlocalized Scaffold Reference bHirRus1.pri.v3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sulfurtransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA wobble position uridine thiolation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytoplasmic tRNA 2-thiolation protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_015227805.2-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bHirRus1.pri.v3

Genomic

  1. NW_026690180.1 Reference bHirRus1.pri.v3

    Range
    27..3837
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040091478.2 → XP_039947412.1  cytoplasmic tRNA 2-thiolation protein 2 isoform X2

    Conserved Domains (1) summary
    cl00292
    Location:22 → 126
    AANH_like; Adenine nucleotide alpha hydrolases superfamily including N type ATP PPases, ATP sulphurylases Universal Stress Response protein and electron transfer flavoprotein (ETF). The domain forms a apha/beta/apha fold which binds to Adenosine nucleotide.

  2. XM_040091477.2 → XP_039947411.1  cytoplasmic tRNA 2-thiolation protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A3M0KDM2
    Related
    ENSHRRP00010030732.1, ENSHRRT00010035373.1
    Conserved Domains (2) summary
    pfam10288
    Location:314 → 404
    CTU2; Cytoplasmic tRNA 2-thiolation protein 2
    cl00292
    Location:22 → 126
    AANH_like; Adenine nucleotide alpha hydrolases superfamily including N type ATP PPases, ATP sulphurylases Universal Stress Response protein and electron transfer flavoprotein (ETF). The domain forms a apha/beta/apha fold which binds to Adenosine nucleotide.
Nucleotide Protein
Heading Accession and Version

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