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PAFAH2 platelet activating factor acetylhydrolase 2 [ Hirundo rustica (Barn swallow) ]

Gene ID: 120763139, updated on 3-Aug-2024

Summary

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Gene symbol
PAFAH2
Gene description
platelet activating factor acetylhydrolase 2
See related
EnsemblRapid:ENSHRRG00010007749
Gene type
protein coding
RefSeq status
MODEL
Organism
Hirundo rustica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Hirundinidae; Hirundo
Orthologs
human mouse all
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Genomic context

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See PAFAH2 in Genome Data Viewer
Location:
chromosome: 25
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_07 current bHirRus1.pri.v3 (GCF_015227805.2) 25 NC_053474.1 (874998..879623, complement)

Chromosome 25 - NC_053474.1Genomic Context describing neighboring genes Neighboring gene progestin and adipoQ receptor family member 7 Neighboring gene stathmin 1 Neighboring gene exostosin like glycosyltransferase 1 Neighboring gene solute carrier family 30 member 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053474.1 Chromosome 25 Reference bHirRus1.pri.v3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1-alkyl-2-acetylglycerophosphocholine esterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
platelet-activating factor acetylhydrolase 2, cytoplasmic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_015227805.2-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bHirRus1.pri.v3

Genomic

  1. NC_053474.1 Reference bHirRus1.pri.v3

    Range
    874998..879623 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040086250.2 → XP_039942184.1  platelet-activating factor acetylhydrolase 2, cytoplasmic

    UniProtKB/TrEMBL
    A0A7L4EHN1
    Related
    ENSHRRP00010010527.1, ENSHRRT00010011141.2
    Conserved Domains (1) summary
    cl21494
    Location:97 → 233
    Abhydrolase; alpha/beta hydrolases

  2. XM_040086251.2 → XP_039942185.1  platelet-activating factor acetylhydrolase 2, cytoplasmic

    UniProtKB/TrEMBL
    A0A7L4EHN1
    Conserved Domains (1) summary
    cl21494
    Location:97 → 233
    Abhydrolase; alpha/beta hydrolases
Nucleotide Protein
Heading Accession and Version

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