U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SGCD sarcoglycan delta [ Hirundo rustica (Barn swallow) ]

Gene ID: 120759103, updated on 3-Aug-2024

Summary

Go to the top of the page Help
Gene symbol
SGCD
Gene description
sarcoglycan delta
See related
EnsemblRapid:ENSHRRG00010005643
Gene type
protein coding
RefSeq status
MODEL
Organism
Hirundo rustica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Hirundinidae; Hirundo
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See SGCD in Genome Data Viewer
Location:
chromosome: 14
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2023_07 current bHirRus1.pri.v3 (GCF_015227805.2) 14 NC_053463.1 (4744909..5242105, complement)

Chromosome 14 - NC_053463.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120759357 Neighboring gene mediator complex subunit 7 Neighboring gene mitochondrial ribosomal protein L22 Neighboring gene gem nuclear organelle associated protein 5

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_053463.1 Chromosome 14 Reference bHirRus1.pri.v3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
delta-sarcoglycan

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_015227805.2-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bHirRus1.pri.v3

Genomic

  1. NC_053463.1 Reference bHirRus1.pri.v3

    Range
    4744909..5242105 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_058422461.1 → XP_058278444.1  delta-sarcoglycan isoform X2

  2. XM_058422456.1 → XP_058278439.1  delta-sarcoglycan isoform X1

    UniProtKB/TrEMBL
    A0A7L4E785

  3. XM_040078046.2 → XP_039933980.1  delta-sarcoglycan isoform X1

    UniProtKB/TrEMBL
    A0A7L4E785
    Conserved Domains (1) summary
    pfam04790
    Location:22 → 276
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  4. XM_058422457.1 → XP_058278440.1  delta-sarcoglycan isoform X1

    UniProtKB/TrEMBL
    A0A7L4E785

  5. XM_058422460.1 → XP_058278443.1  delta-sarcoglycan isoform X1

    UniProtKB/TrEMBL
    A0A7L4E785
    Related
    ENSHRRP00010007753.1, ENSHRRT00010008208.2

  6. XM_040078048.2 → XP_039933982.1  delta-sarcoglycan isoform X1

    UniProtKB/TrEMBL
    A0A7L4E785
    Conserved Domains (1) summary
    pfam04790
    Location:22 → 276
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  7. XM_040078047.2 → XP_039933981.1  delta-sarcoglycan isoform X1

    UniProtKB/TrEMBL
    A0A7L4E785
    Conserved Domains (1) summary
    pfam04790
    Location:22 → 276
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  8. XM_058422459.1 → XP_058278442.1  delta-sarcoglycan isoform X1

    UniProtKB/TrEMBL
    A0A7L4E785

  9. XM_058422458.1 → XP_058278441.1  delta-sarcoglycan isoform X1

    UniProtKB/TrEMBL
    A0A7L4E785

  10. XM_040078050.2 → XP_039933984.1  delta-sarcoglycan isoform X2

    Conserved Domains (1) summary
    pfam04790
    Location:20 → 233
    Sarcoglycan_1; Sarcoglycan complex subunit protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.