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TMED6 transmembrane p24 trafficking protein 6 [ Hirundo rustica (Barn swallow) ]

Gene ID: 120757864, updated on 3-Aug-2024

Summary

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Gene symbol
TMED6
Gene description
transmembrane p24 trafficking protein 6
See related
EnsemblRapid:ENSHRRG00010003055
Gene type
protein coding
RefSeq status
MODEL
Organism
Hirundo rustica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Hirundinidae; Hirundo
Orthologs
human mouse all
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Genomic context

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See TMED6 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_07 current bHirRus1.pri.v3 (GCF_015227805.2) 11 NC_053460.1 (917816..919750)

Chromosome 11 - NC_053460.1Genomic Context describing neighboring genes Neighboring gene cytochrome b5 Neighboring gene telomeric repeat binding factor 2 Neighboring gene nucleolar pre-rRNA processing protein NIP7 Neighboring gene component of oligomeric golgi complex 8

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053460.1 Chromosome 11 Reference bHirRus1.pri.v3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane emp24 domain-containing protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_015227805.2-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bHirRus1.pri.v3

Genomic

  1. NC_053460.1 Reference bHirRus1.pri.v3

    Range
    917816..919750
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040075545.2 → XP_039931479.1  transmembrane emp24 domain-containing protein 6

    UniProtKB/TrEMBL
    A0A3M0K8H1, A0A7L4E734
    Related
    ENSHRRP00010004148.2, ENSHRRT00010004401.2
    Conserved Domains (1) summary
    pfam01105
    Location:37 → 222
    EMP24_GP25L; emp24/gp25L/p24 family/GOLD
Nucleotide Protein
Heading Accession and Version

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