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P3H2 prolyl 3-hydroxylase 2 [ Hirundo rustica (Barn swallow) ]

Gene ID: 120757354, updated on 25-Jun-2024

Summary

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Gene symbol
P3H2
Gene description
prolyl 3-hydroxylase 2
See related
EnsemblRapid:ENSHRRG00010008077
Gene type
protein coding
RefSeq status
MODEL
Organism
Hirundo rustica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Sylvioidea; Hirundinidae; Hirundo
Orthologs
human mouse all
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Genomic context

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See P3H2 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2023_07 current bHirRus1.pri.v3 (GCF_015227805.2) 10 NC_053459.1 (15013516..15112218)

Chromosome 10 - NC_053459.1Genomic Context describing neighboring genes Neighboring gene claudin 16 Neighboring gene claudin 1 Neighboring gene tumor protein p63 Neighboring gene uncharacterized LOC120757452

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053459.1 Chromosome 10 Reference bHirRus1.pri.v3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ascorbic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables procollagen-proline 3-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in collagen metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prolyl 3-hydroxylase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_015227805.2-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bHirRus1.pri.v3

Genomic

  1. NC_053459.1 Reference bHirRus1.pri.v3

    Range
    15013516..15112218
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040074630.2 → XP_039930564.1  prolyl 3-hydroxylase 2 isoform X2

    UniProtKB/TrEMBL
    A0A3M0JM86
    Conserved Domains (1) summary
    smart00702
    Location:367 → 565
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues

  2. XM_040074629.2 → XP_039930563.1  prolyl 3-hydroxylase 2 isoform X1

    UniProtKB/TrEMBL
    A0A7L4ECX3
    Related
    ENSHRRP00010011226.1, ENSHRRT00010011886.2
    Conserved Domains (1) summary
    smart00702
    Location:464 → 662
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues

  3. XM_058421983.1 → XP_058277966.1  prolyl 3-hydroxylase 2 isoform X3

    UniProtKB/TrEMBL
    A0A3M0JM86
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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