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CH25H cholesterol 25-hydroxylase [ Hirundo rustica (Barn swallow) ]

Gene ID: 120755894, updated on 3-Aug-2024

Summary

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Gene symbol
CH25H
Gene description
cholesterol 25-hydroxylase
See related
EnsemblRapid:ENSHRRG00010001171
Gene type
protein coding
RefSeq status
MODEL
Organism
Hirundo rustica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Hirundinidae; Hirundo
Orthologs
human mouse all
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Genomic context

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See CH25H in Genome Data Viewer
Location:
chromosome: 8
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_07 current bHirRus1.pri.v3 (GCF_015227805.2) 8 NC_053457.1 (19140846..19144361, complement)

Chromosome 8 - NC_053457.1Genomic Context describing neighboring genes Neighboring gene Fas cell surface death receptor Neighboring gene uncharacterized LOC120755903 Neighboring gene lipase A, lysosomal acid type Neighboring gene interferon-induced protein with tetratricopeptide repeats 5-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053457.1 Chromosome 8 Reference bHirRus1.pri.v3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables C-4 methylsterol oxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables steroid hydroxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cholesterol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sterol biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cholesterol 25-hydroxylase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_015227805.2-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bHirRus1.pri.v3

Genomic

  1. NC_053457.1 Reference bHirRus1.pri.v3

    Range
    19140846..19144361 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040071497.1 → XP_039927431.1  cholesterol 25-hydroxylase

    UniProtKB/TrEMBL
    A0A7L4ELZ6
    Related
    ENSHRRP00010001572.2, ENSHRRT00010001664.2
    Conserved Domains (1) summary
    COG3000
    Location:106 → 268
    ERG3; Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily [Lipid transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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