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RNF141 ring finger protein 141 [ Hirundo rustica (Barn swallow) ]

Gene ID: 120753778, updated on 10-Oct-2024

Summary

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Gene symbol
RNF141
Gene description
ring finger protein 141
See related
EnsemblRapid:ENSHRRG00010012445
Gene type
protein coding
RefSeq status
MODEL
Organism
Hirundo rustica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Hirundinidae; Hirundo
Orthologs
human mouse all
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Genomic context

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See RNF141 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_07 current bHirRus1.pri.v3 (GCF_015227805.2) 6 NC_053455.1 (59542625..59554959)

Chromosome 6 - NC_053455.1Genomic Context describing neighboring genes Neighboring gene inositol 1,4,5-triphosphate receptor associated 1 Neighboring gene lymphatic vessel endothelial hyaluronan receptor 1 Neighboring gene adenosine monophosphate deaminase 3 Neighboring gene uncharacterized LOC120753781

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053455.1 Chromosome 6 Reference bHirRus1.pri.v3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin-protein transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein autoubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RING finger protein 141

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_015227805.2-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bHirRus1.pri.v3

Genomic

  1. NC_053455.1 Reference bHirRus1.pri.v3

    Range
    59542625..59554959
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040066467.1 → XP_039922401.1  RING finger protein 141

    UniProtKB/TrEMBL
    A0A7L4E520
    Conserved Domains (2) summary
    COG5243
    Location:112 → 233
    HRD1; HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]
    cd16545
    Location:168 → 206
    RING-HC_RNF141; RING finger, HC subclass, found in RING finger protein 141 (RNF141) and similar proteins

  2. XM_040066470.1 → XP_039922404.1  RING finger protein 141

    UniProtKB/TrEMBL
    A0A7L4E520
    Related
    ENSHRRP00010016858.1, ENSHRRT00010017870.2
    Conserved Domains (2) summary
    COG5243
    Location:112 → 233
    HRD1; HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]
    cd16545
    Location:168 → 206
    RING-HC_RNF141; RING finger, HC subclass, found in RING finger protein 141 (RNF141) and similar proteins

  3. XM_040066468.1 → XP_039922402.1  RING finger protein 141

    UniProtKB/TrEMBL
    A0A7L4E520
    Conserved Domains (2) summary
    COG5243
    Location:112 → 233
    HRD1; HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]
    cd16545
    Location:168 → 206
    RING-HC_RNF141; RING finger, HC subclass, found in RING finger protein 141 (RNF141) and similar proteins

  4. XM_040066469.1 → XP_039922403.1  RING finger protein 141

    UniProtKB/TrEMBL
    A0A7L4E520
    Conserved Domains (2) summary
    COG5243
    Location:112 → 233
    HRD1; HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]
    cd16545
    Location:168 → 206
    RING-HC_RNF141; RING finger, HC subclass, found in RING finger protein 141 (RNF141) and similar proteins

  5. XM_040066466.2 → XP_039922400.1  RING finger protein 141

    UniProtKB/TrEMBL
    A0A7L4E520
    Conserved Domains (2) summary
    COG5243
    Location:112 → 233
    HRD1; HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]
    cd16545
    Location:168 → 206
    RING-HC_RNF141; RING finger, HC subclass, found in RING finger protein 141 (RNF141) and similar proteins

  6. XM_058420985.1 → XP_058276968.1  RING finger protein 141

Nucleotide Protein
Heading Accession and Version

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