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PNPLA4 patatin like phospholipase domain containing 4 [ Hirundo rustica (Barn swallow) ]

Gene ID: 120749290, updated on 18-Sep-2024

Summary

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Gene symbol
PNPLA4
Gene description
patatin like phospholipase domain containing 4
See related
EnsemblRapid:ENSHRRG00010006727
Gene type
protein coding
RefSeq status
MODEL
Organism
Hirundo rustica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Hirundinidae; Hirundo
Orthologs
human all
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Genomic context

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See PNPLA4 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_07 current bHirRus1.pri.v3 (GCF_015227805.2) 2 NC_053451.1 (97765670..97786214, complement)

Chromosome 2 - NC_053451.1Genomic Context describing neighboring genes Neighboring gene pseudouridine 5'-phosphatase Neighboring gene steroid sulfatase Neighboring gene uncharacterized LOC120749506 Neighboring gene uncharacterized LOC120749169 Neighboring gene uncharacterized LOC120765028

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053451.1 Chromosome 2 Reference bHirRus1.pri.v3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables retinyl-palmitate esterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables triacylglycerol lipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in triglyceride catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lipid droplet IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
patatin-like phospholipase domain-containing protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_015227805.2-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bHirRus1.pri.v3

Genomic

  1. NC_053451.1 Reference bHirRus1.pri.v3

    Range
    97765670..97786214 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040056555.2 → XP_039912489.1  patatin-like phospholipase domain-containing protein 4 isoform X2

    UniProtKB/TrEMBL
    A0A3M0K5B0
    Conserved Domains (1) summary
    cd07222
    Location:93 → 336
    Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4

  2. XM_040056556.2 → XP_039912490.1  patatin-like phospholipase domain-containing protein 4 isoform X3

    Conserved Domains (1) summary
    cl11396
    Location:28 → 217
    Patatin_and_cPLA2; Patatins and Phospholipases

  3. XM_040056557.2 → XP_039912491.1  patatin-like phospholipase domain-containing protein 4 isoform X4

    Conserved Domains (1) summary
    cl11396
    Location:2 → 191
    Patatin_and_cPLA2; Patatins and Phospholipases

  4. XM_040056554.2 → XP_039912488.1  patatin-like phospholipase domain-containing protein 4 isoform X1

    UniProtKB/TrEMBL
    A0A3M0K5B0
    Related
    ENSHRRP00010009186.1, ENSHRRT00010009718.2
    Conserved Domains (1) summary
    cd07222
    Location:102 → 347
    Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4
Nucleotide Protein
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