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LOC120708022 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A-like [ Panicum virgatum (switchgrass) ]

Gene ID: 120708022, updated on 7-Dec-2023

Summary

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Gene symbol
LOC120708022
Gene description
dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A-like
Locus tag
PVAP13_5KG547900
Gene type
protein coding
RefSeq status
MODEL
Organism
Panicum virgatum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum; Panicum sect. Hiantes
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Genomic context

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See LOC120708022 in Genome Data Viewer
Location:
chromosome: 5K
Exon count:
12
Annotation release Status Assembly Chr Location
100 current P.virgatum_v5 (GCF_016808335.1) 5K NC_053140.1 (48210073..48224547)

Chromosome 5K - NC_053140.1Genomic Context describing neighboring genes Neighboring gene zinc finger CCCH domain-containing protein 19-like Neighboring gene nuclear pore complex protein NUP85-like Neighboring gene carotenoid cleavage dioxygenase 8 homolog A, chloroplastic-like Neighboring gene glyceraldehyde-3-phosphate dehydrogenase 3, cytosolic-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053140.1 Chromosome 5K Reference P.virgatum_v5 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oligosaccharyl transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panicum virgatum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.virgatum_v5 Primary Assembly

Genomic

  1. NC_053140.1 Reference P.virgatum_v5 Primary Assembly

    Range
    48210073..48224547
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039993108.1 → XP_039849042.1  dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A-like

    UniProtKB/TrEMBL
    A0A8T0SWV4
    Conserved Domains (1) summary
    COG1287
    Location:28 → 303
    Stt3; Asparagine N-glycosylation enzyme, membrane subunit Stt3 [Posttranslational modification, protein turnover, chaperones]
Nucleotide Protein Strain
Heading Accession and Version

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