U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC120702177 xyloglucan galactosyltransferase KATAMARI1 homolog [ Panicum virgatum (switchgrass) ]

Gene ID: 120702177, updated on 7-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC120702177
Gene description
xyloglucan galactosyltransferase KATAMARI1 homolog
Locus tag
PVAP13_4KG290800
Gene type
protein coding
RefSeq status
MODEL
Organism
Panicum virgatum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum; Panicum sect. Hiantes
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC120702177 in Genome Data Viewer
Location:
chromosome: 4K
Exon count:
2
Annotation release Status Assembly Chr Location
100 current P.virgatum_v5 (GCF_016808335.1) 4K NC_053139.1 (35783383..35785087, complement)

Chromosome 4K - NC_053139.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120703738 Neighboring gene 1-aminocyclopropane-1-carboxylate oxidase 1-like Neighboring gene translation initiation factor IF-2-like Neighboring gene (S)-coclaurine N-methyltransferase-like Neighboring gene U-box domain-containing protein 34-like Neighboring gene transcriptional elongation regulator MINIYO-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_053139.1 Chromosome 4K Reference P.virgatum_v5 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
xyloglucan galactosyltransferase KATAMARI1 homolog

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Panicum virgatum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.virgatum_v5 Primary Assembly

Genomic

  1. NC_053139.1 Reference P.virgatum_v5 Primary Assembly

    Range
    35783383..35785087 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039985919.1 → XP_039841853.1  xyloglucan galactosyltransferase KATAMARI1 homolog

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases