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LOC120698856 UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4-like [ Panicum virgatum (switchgrass) ]

Gene ID: 120698856, updated on 7-Dec-2023

Summary

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Gene symbol
LOC120698856
Gene description
UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4-like
Locus tag
PVAP13_3KG265263
Gene type
protein coding
RefSeq status
MODEL
Organism
Panicum virgatum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum; Panicum sect. Hiantes
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Genomic context

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See LOC120698856 in Genome Data Viewer
Location:
chromosome: 3K
Exon count:
5
Annotation release Status Assembly Chr Location
100 current P.virgatum_v5 (GCF_016808335.1) 3K NC_053138.1 (29181798..29194302, complement)

Chromosome 3K - NC_053138.1Genomic Context describing neighboring genes Neighboring gene UDP-sulfoquinovose synthase, chloroplastic-like Neighboring gene uncharacterized LOC120698857 Neighboring gene histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4-like Neighboring gene uncharacterized LOC120698858

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053138.1 Chromosome 3K Reference P.virgatum_v5 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panicum virgatum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.virgatum_v5 Primary Assembly

Genomic

  1. NC_053138.1 Reference P.virgatum_v5 Primary Assembly

    Range
    29181798..29194302 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039982614.1 → XP_039838548.1  UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4-like

    UniProtKB/TrEMBL
    A0A8T0UBW6, A0A8T0UUD3
    Conserved Domains (1) summary
    pfam03407
    Location:119 → 333
    Nucleotid_trans; Nucleotide-diphospho-sugar transferase

RNA

  1. XR_005685048.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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