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LOC120692143 xyloglucan galactosyltransferase KATAMARI1 homolog [ Panicum virgatum (switchgrass) ]

Gene ID: 120692143, updated on 7-Dec-2023

Summary

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Gene symbol
LOC120692143
Gene description
xyloglucan galactosyltransferase KATAMARI1 homolog
Locus tag
PVAP13_9NG752300
Gene type
protein coding
RefSeq status
MODEL
Organism
Panicum virgatum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum; Panicum sect. Hiantes
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Genomic context

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See LOC120692143 in Genome Data Viewer
Location:
chromosome: 9N
Exon count:
1
Annotation release Status Assembly Chr Location
100 current P.virgatum_v5 (GCF_016808335.1) 9N NC_053153.1 (79404887..79406609, complement)

Chromosome 9N - NC_053153.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120692035 Neighboring gene xyloglucan galactosyltransferase KATAMARI1 homolog Neighboring gene xyloglucan galactosyltransferase KATAMARI1 homolog Neighboring gene xyloglucan galactosyltransferase KATAMARI1 homolog

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053153.1 Chromosome 9N Reference P.virgatum_v5 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
xyloglucan galactosyltransferase KATAMARI1 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panicum virgatum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.virgatum_v5 Primary Assembly

Genomic

  1. NC_053153.1 Reference P.virgatum_v5 Primary Assembly

    Range
    79404887..79406609 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039975385.1 → XP_039831319.1  xyloglucan galactosyltransferase KATAMARI1 homolog

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases